Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G407100.1 | Wheat | plastid | 34.59 | 35.07 |
| Solyc12g005500.1.1 | Tomato | plastid | 31.16 | 32.16 |
| PGSC0003DMT400056251 | Potato | cytosol, golgi, mitochondrion | 31.16 | 31.49 |
| PGSC0003DMT400035734 | Potato | cytosol, mitochondrion, plastid | 31.16 | 31.16 |
| Solyc10g008140.2.1 | Tomato | plastid | 30.82 | 31.14 |
| TraesCS4A01G344900.1 | Wheat | mitochondrion, plastid | 27.74 | 30.22 |
| GSMUA_Achr3P21940_001 | Banana | mitochondrion | 20.55 | 28.44 |
| TraesCS2A01G337100.1 | Wheat | mitochondrion | 24.32 | 24.91 |
| TraesCS6A01G198500.1 | Wheat | mitochondrion | 23.29 | 21.59 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G346300.1 | EnsemblPlantsGene:TraesCS4A01G346300 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Prohibitin | ncoils:Coil |
| PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | PRINTS:PR00679 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4A:+:625228338..625232830
Molecular Weight (calculated)
31991.0 Da
IEP (calculated)
9.809
GRAVY (calculated)
-0.298
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MGARTPSAPA GSSALVRLGL LGGAGQQDPP QVVFKRLEGI KQKVYAEGTQ IVISGSRSRS STTSAHDPTQ AGGEHLREPG LAVSREIRKV LTERAKNFNI
101: ALDDVSITSL SFGKEFTHAI EAKQVAAQKA ERAKFIVEKA EQDKRSAIVR AQEALSRWSA CVRLAPLREN VGWQRITVKY GLFRWTFSGM FVRLNIVSDF
201: QWYVGCEQGD QGDFDSEAKN FNIALDGVSV TSLNFGKEFT HAIEAEQVAA HQAEHAKFIV EKAEQDKKSA IVLYAPLTVS VIVTTTGKQN RN
101: ALDDVSITSL SFGKEFTHAI EAKQVAAQKA ERAKFIVEKA EQDKRSAIVR AQEALSRWSA CVRLAPLREN VGWQRITVKY GLFRWTFSGM FVRLNIVSDF
201: QWYVGCEQGD QGDFDSEAKN FNIALDGVSV TSLNFGKEFT HAIEAEQVAA HQAEHAKFIV EKAEQDKKSA IVLYAPLTVS VIVTTTGKQN RN
001: MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
Arabidopsis Description
PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.