Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P08390_001 | Banana | mitochondrion | 57.35 | 41.44 |
| GSMUA_Achr11P... | Banana | unclear | 56.4 | 40.75 |
| GSMUA_Achr7P03130_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 54.98 | 40.0 |
| Solyc12g005500.1.1 | Tomato | plastid | 50.24 | 37.46 |
| PGSC0003DMT400035734 | Potato | cytosol, mitochondrion, plastid | 51.18 | 36.99 |
| PGSC0003DMT400056251 | Potato | cytosol, golgi, mitochondrion | 50.24 | 36.68 |
| Solyc10g008140.2.1 | Tomato | plastid | 49.76 | 36.33 |
| GSMUA_Achr6P12800_001 | Banana | cytosol | 18.96 | 34.48 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 28.44 | 23.62 |
| TraesCS4A01G346300.1 | Wheat | mitochondrion, plastid | 28.44 | 20.55 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 18.96 | 13.07 |
| GSMUA_Achr6P12790_001 | Banana | golgi | 13.74 | 12.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P21940_001 | EnsemblPlants:GSMUA_Achr3T21940_001 | EnsemblPlantsGene:GSMUA_Achr3G21940_001 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | InterPro:Prohibitin | ncoils:Coil | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | PFAM:PF01145 |
| PRINTS:PR00679 | SEG:seg | SUPFAM:SSF117892 | UniParc:UPI0002968686 | UniProt:M0SGR0 | MapMan:35.1 |
Description
Putative Prohibitin-2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G21940_001]
Coordinates
chr3:+:22877017..22878996
Molecular Weight (calculated)
24003.5 Da
IEP (calculated)
6.512
GRAVY (calculated)
0.219
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPWFKRPII YDVRTLLHLV ESTSGNRDLQ MVTLLFHQFA DLDHLQLLLF MIGETKMKLK QFVSSPIHNL IAIHVISSLC CERMAVSQEI QKILTERARN
101: FNIALDDISI TSLIFVKELT NAIKLKQVAA QEAECAEFIV EKAEKDKNSA VISMSTNSTF SREKMINNLQ FATIAFLALR QIEAADEIAH IIANSSIRIF
201: LQSDDLLLNQ L
101: FNIALDDISI TSLIFVKELT NAIKLKQVAA QEAECAEFIV EKAEKDKNSA VISMSTNSTF SREKMINNLQ FATIAFLALR QIEAADEIAH IIANSSIRIF
201: LQSDDLLLNQ L
001: MNNVKVPKIP GGGAISTLLK VGIIGGLGLY GATHSLYNVE GGHRAIMFNR LVGIKDKVYP EGTHLMIPWF ERPVIYDVRA RPYLVESTSG SRDLQMVKIG
101: LRVLTRPMAD QLPEIYRSLG ENYSERVLPS IINETLKAVV AQYNASQLIT QREAVSREIR KILTERAANF NVALDDVSIT NLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDKRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA NSANKVYLSS DDLLLNLQGM NLDVDAKN
101: LRVLTRPMAD QLPEIYRSLG ENYSERVLPS IINETLKAVV AQYNASQLIT QREAVSREIR KILTERAANF NVALDDVSIT NLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDKRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA NSANKVYLSS DDLLLNLQGM NLDVDAKN
Arabidopsis Description
PHB1PHB1 [Source:UniProtKB/TrEMBL;Acc:A0A178UY74]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.