Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | unclear | 85.52 | 84.93 |
| GSMUA_Achr8P08390_001 | Banana | mitochondrion | 84.83 | 84.25 |
| KRH29315 | Soybean | endoplasmic reticulum, mitochondrion | 80.0 | 80.28 |
| KRH24002 | Soybean | mitochondrion | 79.31 | 79.58 |
| KRH39037 | Soybean | mitochondrion | 78.97 | 79.24 |
| KRH22328 | Soybean | cytosol, mitochondrion | 67.93 | 74.9 |
| KRH26997 | Soybean | mitochondrion, nucleus | 79.66 | 68.75 |
| GSMUA_Achr3P21940_001 | Banana | mitochondrion | 40.0 | 54.98 |
| GSMUA_Achr6P12800_001 | Banana | cytosol | 21.03 | 52.59 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 35.86 | 40.94 |
| GSMUA_Achr6P12790_001 | Banana | golgi | 26.21 | 31.67 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 25.86 | 24.51 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P03130_001 | EnsemblPlants:GSMUA_Achr7T03130_001 | EnsemblPlantsGene:GSMUA_Achr7G03130_001 | Gene3D:3.30.479.30 | GO:GO:0005575 | GO:GO:0016020 |
| InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | InterPro:Prohibitin | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | PFAM:PF01145 |
| PRINTS:PR00679 | SMART:SM00244 | SUPFAM:SSF117892 | TMHMM:TMhelix | UniParc:UPI0002960C97 | UniProt:M0TEA3 |
| MapMan:35.1 | : | : | : | : | : |
Description
Prohibitin-2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G03130_001]
Coordinates
chr7:-:2470767..2477306
Molecular Weight (calculated)
32112.7 Da
IEP (calculated)
9.691
GRAVY (calculated)
-0.088
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFKNVKGPS VPSAVGTLVK VALIGGTAVY AALNSLYNVD GGHRAIVFNR IVGIKDKVYP EGTHLMIPWF EWPVIYDVRA RPHLVESTSG SRDLQMVNIG
101: LRVLTRPIPD QLPTIYRTLG GNYNERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERARNF NIVLDDVSIT TLSFGKEFTI AIESKQVAAQ
201: EAERAKFIVE KAEQDKKSAI IRAQGEATSA QLIGQAIANN PAFLALRQIE SAREIAHTIA NSSNRVFLQS DDLLLNLHEL NFDGEATLKK
101: LRVLTRPIPD QLPTIYRTLG GNYNERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERARNF NIVLDDVSIT TLSFGKEFTI AIESKQVAAQ
201: EAERAKFIVE KAEQDKKSAI IRAQGEATSA QLIGQAIANN PAFLALRQIE SAREIAHTIA NSSNRVFLQS DDLLLNLHEL NFDGEATLKK
001: MNNVKVPKIP GGGAISTLLK VGIIGGLGLY GATHSLYNVE GGHRAIMFNR LVGIKDKVYP EGTHLMIPWF ERPVIYDVRA RPYLVESTSG SRDLQMVKIG
101: LRVLTRPMAD QLPEIYRSLG ENYSERVLPS IINETLKAVV AQYNASQLIT QREAVSREIR KILTERAANF NVALDDVSIT NLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDKRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA NSANKVYLSS DDLLLNLQGM NLDVDAKN
101: LRVLTRPMAD QLPEIYRSLG ENYSERVLPS IINETLKAVV AQYNASQLIT QREAVSREIR KILTERAANF NVALDDVSIT NLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDKRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA NSANKVYLSS DDLLLNLQGM NLDVDAKN
Arabidopsis Description
PHB1PHB1 [Source:UniProtKB/TrEMBL;Acc:A0A178UY74]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.