Factsheet for GSMUA_Achr8P08390_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	unclear	93.15	93.15
GSMUA_Achr7P03130_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	84.25	84.83
Zm00001d034795_P002	Maize	mitochondrion	83.22	84.08
EER90545	Sorghum	cytosol, mitochondrion, peroxisome	82.53	83.39
EER98334	Sorghum	mitochondrion	82.19	83.05
Zm00001d005485_P001	Maize	mitochondrion	82.19	83.05
Os07t0262200-02	Rice	mitochondrion, plasma membrane, plastid	81.51	82.35
KRH39037	Soybean	mitochondrion	81.51	82.35
KRH24002	Soybean	mitochondrion	80.82	81.66
TraesCS5B01G528100.1	Wheat	endoplasmic reticulum, plasma membrane	78.77	81.56
KRH29315	Soybean	endoplasmic reticulum, mitochondrion	80.48	81.31
TraesCS1A01G407100.1	Wheat	plastid	78.77	79.86
TraesCS5D01G527100.1	Wheat	golgi, unclear	78.77	79.58
KRH22328	Soybean	cytosol, mitochondrion	70.89	78.71
Os03t0841700-02	Rice	mitochondrion	77.74	78.28
KRH26997	Soybean	mitochondrion, nucleus	80.14	69.64
HORVU5Hr1G119470.2	Barley	mitochondrion	51.71	67.71
TraesCS4A01G344900.1	Wheat	mitochondrion, plastid	58.22	63.43
HORVU5Hr1G119700.3	Barley	mitochondrion, plastid	62.67	62.89
GSMUA_Achr3P21940_001	Banana	mitochondrion	41.44	57.35
GSMUA_Achr6P12800_001	Banana	cytosol	21.23	53.45
Os03t0814600-00	Rice	cytosol	63.7	43.16
GSMUA_Achr3P20260_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	35.96	41.34
GSMUA_Achr6P12790_001	Banana	golgi	28.08	34.17
GSMUA_Achr7P18670_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	25.68	24.51

Protein Annotations

EnsemblPlants:GSMUA_Achr8P08390_001	EnsemblPlants:GSMUA_Achr8T08390_001	EnsemblPlantsGene:GSMUA_Achr8G08390_001	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Prohibitin	PANTHER:PTHR23222	PANTHER:PTHR23222:SF4	PFAM:PF01145
PRINTS:PR00679	SMART:SM00244	SUPFAM:SSF117892	TMHMM:TMhelix	UniParc:UPI0002959A84	UniProt:M0TNP2
MapMan:35.1	:	:	:	:	:

Description

Prohibitin-2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G08390_001]

Coordinates

chr8:-:5590512..5594234

Molecular Weight (calculated)

32347.1 Da

IEP (calculated)

10.162

GRAVY (calculated)

-0.161

Length

292 amino acids

Sequence
(BLAST)

001: MSFRNVKVPN IPGSGASAAL VKVALIGGTV VYAALNSIYN VDGGHRAIVF NRIEGIKDKV YPEGTHLMIP WFERPIIYDV RARPNLVEST SGSRDLQMVK
101: IGLRVLTRPL PDQLPTIYRS LGENYNERVL PSIIHETLKA VVAQYNASQL ITQREAVSRE IRKILTERAR NFNIALDDVS ITSLSFGKEF TNAIEAKQVA
201: AQEAERAKFI VEKAEQDKKS AVIRAQGEAK SAQLIGQAIA NNPAFLALRQ IEAAREIAHT IANSSNRVFL QSNDLLLNLQ ELNFEGTTKL KK

Best Arabidopsis Sequence Match ( AT1G03860.1 )
(BLAST)

001: MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK

Arabidopsis Description

PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.