Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G528100.1 | Wheat | endoplasmic reticulum, plasma membrane | 71.48 | 73.76 |
| TraesCS5D01G527100.1 | Wheat | golgi, unclear | 71.48 | 71.97 |
| Os03t0841700-02 | Rice | mitochondrion | 64.6 | 64.83 |
| EER90545 | Sorghum | cytosol, mitochondrion, peroxisome | 63.57 | 64.01 |
| Zm00001d034795_P002 | Maize | mitochondrion | 63.23 | 63.67 |
| GSMUA_Achr8P08390_001 | Banana | mitochondrion | 62.89 | 62.67 |
| HORVU5Hr1G119470.2 | Barley | mitochondrion | 47.77 | 62.33 |
| GSMUA_Achr11P... | Banana | unclear | 62.2 | 61.99 |
| KRH29315 | Soybean | endoplasmic reticulum, mitochondrion | 60.82 | 61.25 |
| KRH39037 | Soybean | mitochondrion | 60.14 | 60.55 |
| KRH24002 | Soybean | mitochondrion | 60.14 | 60.55 |
| PGSC0003DMT400056251 | Potato | cytosol, golgi, mitochondrion | 59.11 | 59.52 |
| KRH22328 | Soybean | cytosol, mitochondrion | 53.26 | 58.94 |
| Solyc10g008140.2.1 | Tomato | plastid | 57.73 | 58.13 |
| Solyc12g005500.1.1 | Tomato | plastid | 56.36 | 57.95 |
| PGSC0003DMT400035734 | Potato | cytosol, mitochondrion, plastid | 58.08 | 57.88 |
| KRH26997 | Soybean | mitochondrion, nucleus | 61.17 | 52.98 |
| HORVU6Hr1G047300.2 | Barley | plasma membrane | 35.05 | 29.48 |
| VIT_16s0100g00070.t01 | Wine grape | cytosol, extracellular, golgi | 3.44 | 14.08 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G119700.3 | EnsemblPlantsGene:HORVU5Hr1G119700 | Gene3D:3.30.479.30 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | InterPro:Prohibitin | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | PFAM:PF01145 | PRINTS:PR00679 |
| SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 | UniParc:UPI000B475F42 | UniProt:A0A287SXK5 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr5H:-:656515200..656517796
Molecular Weight (calculated)
32052.3 Da
IEP (calculated)
11.175
GRAVY (calculated)
-0.381
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: RRAWARWSSS GCSAAPRSTS ATRPSTTSRE ATGPSSSTAS RGSRTRLPPP LPSPRADPSI PAARATASLA PRRSSTRFDI WSPLSAQVYP EGTHIVIPWF
101: ERPIIYDVRA RPNLVESTSG SRDLQMVRIG LRVLTRPMPE RLPTMYRTLG ENYNERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERAKNF
201: NIALDDVSIT SLSFGKEFTH AIEAKQGEAK SAELIGNAIA NNPAFVALRQ IEAAREIAHT IAVSNNKVFL DSGDLLLGLQ SLKMLNNNNK K
101: ERPIIYDVRA RPNLVESTSG SRDLQMVRIG LRVLTRPMPE RLPTMYRTLG ENYNERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERAKNF
201: NIALDDVSIT SLSFGKEFTH AIEAKQGEAK SAELIGNAIA NNPAFVALRQ IEAAREIAHT IAVSNNKVFL DSGDLLLGLQ SLKMLNNNNK K
001: MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
Arabidopsis Description
PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.