Factsheet for Zm00001d034795_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plasma membrane 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
MultiLoc:	plasma membrane
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90545	Sorghum	cytosol, mitochondrion, peroxisome	91.0	91.0
TraesCS5B01G528100.1	Wheat	endoplasmic reticulum, plasma membrane	83.39	85.46
Zm00001d005485_P001	Maize	mitochondrion	84.43	84.43
GSMUA_Achr8P08390_001	Banana	mitochondrion	84.08	83.22
TraesCS5D01G527100.1	Wheat	golgi, unclear	82.01	82.01
TraesCS1A01G407100.1	Wheat	plastid	81.66	81.94
Os03t0841700-02	Rice	mitochondrion	80.97	80.69
GSMUA_Achr11P...	Banana	unclear	80.97	80.14
KRH39037	Soybean	mitochondrion	79.58	79.58
KRH29315	Soybean	endoplasmic reticulum, mitochondrion	77.51	77.51
KRH24002	Soybean	mitochondrion	76.82	76.82
PGSC0003DMT400056251	Potato	cytosol, golgi, mitochondrion	76.82	76.82
Solyc10g008140.2.1	Tomato	plastid	76.47	76.47
KRH22328	Soybean	cytosol, mitochondrion	68.86	75.67
PGSC0003DMT400035734	Potato	cytosol, mitochondrion, plastid	75.78	75.0
Solyc12g005500.1.1	Tomato	plastid	71.63	73.14
Zm00001d019341_P001	Maize	mitochondrion	23.18	72.04
HORVU5Hr1G119470.2	Barley	mitochondrion	55.02	71.3
KRH26997	Soybean	mitochondrion, nucleus	80.28	69.05
TraesCS4A01G344900.1	Wheat	mitochondrion, plastid	61.25	66.04
HORVU5Hr1G119700.3	Barley	mitochondrion, plastid	63.67	63.23
Zm00001d016979_P001	Maize	mitochondrion	40.14	41.13
Zm00001d025619_P001	Maize	mitochondrion	40.14	40.85

Protein Annotations

Gene3D:3.30.479.30	MapMan:35.1	EntrezGene:541818	UniProt:B4FMS7	EMBL:BT038415	InterPro:Band_7
InterPro:Band_7/SPFH_dom_sf	EMBL:EU964164	GO:GO:0005575	GO:GO:0016020	ProteinID:ONM11414.1	ProteinID:ONM11415.1
PFAM:PF01145	PRINTS:PR00679	PANTHER:PTHR23222	PANTHER:PTHR23222:SF4	InterPro:Prohibitin	SMART:SM00244
SUPFAM:SSF117892	UniParc:UPI00017B6DD5	EnsemblPlantsGene:Zm00001d034795	EnsemblPlants:Zm00001d034795_P002	EnsemblPlants:Zm00001d034795_T002	SEG:seg

Description

prohibitin4 prohibitin4

Coordinates

chr1:-:302374919..302378019

Molecular Weight (calculated)

31917.7 Da

IEP (calculated)

10.289

GRAVY (calculated)

-0.188

Length

289 amino acids

Sequence
(BLAST)

001: MDSLRGVKLP GVPKGGSALV KVALLGGAGL YAVLNSFYNV EGGHRAIVFN RLEGIKDKVY PEGTHLMIPW IERPIIYDVR ARPNLVESTS GSRDLQMVRI
101: GLRVLTRPMP DQLPKIYRNL GENFNERVLP SIIHETLKAV VAQYNASQLI TQREAVSREI RKILTERANN FNIALDDVSI TSLSFGKEFT HAIEAKQVAA
201: QEAERAKFIV EKAEQDKRSA VIRAQGEAKS AELIGQAIAN NPAFLALRQI EAAREISHTM AASSNKVFLD SRDLLLGLQQ LNVGGKQKK

Best Arabidopsis Sequence Match ( AT1G03860.1 )
(BLAST)

001: MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK

Arabidopsis Description

PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.