Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
plasma membrane: 23508561 mitochondrion: 27297264 plasma membrane: 27341663 mitochondrion: 29575040 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98334 | Sorghum | mitochondrion | 98.96 | 98.96 |
| Os07t0262200-02 | Rice | mitochondrion, plasma membrane, plastid | 91.7 | 91.7 |
| Zm00001d034795_P002 | Maize | mitochondrion | 84.43 | 84.43 |
| Zm00001d019341_P001 | Maize | mitochondrion | 26.99 | 83.87 |
| GSMUA_Achr11P... | Banana | unclear | 83.39 | 82.53 |
| GSMUA_Achr8P08390_001 | Banana | mitochondrion | 83.05 | 82.19 |
| KRH29315 | Soybean | endoplasmic reticulum, mitochondrion | 79.93 | 79.93 |
| KRH24002 | Soybean | mitochondrion | 79.58 | 79.58 |
| KRH39037 | Soybean | mitochondrion | 79.58 | 79.58 |
| PGSC0003DMT400056251 | Potato | cytosol, golgi, mitochondrion | 77.85 | 77.85 |
| Solyc10g008140.2.1 | Tomato | plastid | 77.85 | 77.85 |
| KRH22328 | Soybean | cytosol, mitochondrion | 69.55 | 76.43 |
| PGSC0003DMT400035734 | Potato | cytosol, mitochondrion, plastid | 77.16 | 76.37 |
| Solyc12g005500.1.1 | Tomato | plastid | 73.01 | 74.56 |
| KRH26997 | Soybean | mitochondrion, nucleus | 80.28 | 69.05 |
| Zm00001d025619_P001 | Maize | mitochondrion | 42.21 | 42.96 |
| Zm00001d016979_P001 | Maize | mitochondrion | 40.48 | 41.49 |
Protein Annotations
| EMBL:AF236368 | EMBL:BT065380 | EnsemblPlants:Zm00001d005485_P001 | EnsemblPlants:Zm00001d005485_T001 | EnsemblPlantsGene:Zm00001d005485 | EntrezGene:542542 |
| GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | InterPro:Prohibitin | PANTHER:PTHR23222 |
| PANTHER:PTHR23222:SF4 | PFAM:PF01145 | PRINTS:PR00679 | ProteinID:ONM21292.1 | SEG:seg | SMART:SM00244 |
| SUPFAM:SSF117892 | UniParc:UPI00000A007F | UniProt:Q9M589 | MapMan:35.1 | : | : |
Description
prohibitin1 prohibitin1
Coordinates
chr2:-:175607776..175613053
Molecular Weight (calculated)
32080.8 Da
IEP (calculated)
10.400
GRAVY (calculated)
-0.172
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVKGGSRIP VPPPGASALV KVAVFGGAAV YAAVNSLYNV EGGHRAIVFN RIQGIKDKVY PEGTHFMIPW FERPIIYDVR ARPNLVESTS GSRDLQMVKI
101: GLRVLTRPMP ERLPHIYRTL GENFNERVLP SIIHETLKAV VAQYNASQLI TQRETVSREI RKILTERARF FNIALDDVSI TSLSFGKEFT HAIEAKQVAA
201: QEAERAKFIV EKAEQDKRSA IIRAQGEAKS AELIGQAIAN NPAFLALRQI EAAREISHTI SASANKVFLD SNDLLLNLQQ LNVSSKQKK
101: GLRVLTRPMP ERLPHIYRTL GENFNERVLP SIIHETLKAV VAQYNASQLI TQRETVSREI RKILTERARF FNIALDDVSI TSLSFGKEFT HAIEAKQVAA
201: QEAERAKFIV EKAEQDKRSA IIRAQGEAKS AELIGQAIAN NPAFLALRQI EAAREISHTI SASANKVFLD SNDLLLNLQQ LNVSSKQKK
001: MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
Arabidopsis Description
PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.