Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
19010998
mitochondrion: 23027867 plastid: 27992503 plasma membrane: 28056797 |
msms PMID:
23027867
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID:
19010998
doi
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0262200-02 | Rice | mitochondrion, plasma membrane, plastid | 83.1 | 83.39 |
| EER90545 | Sorghum | cytosol, mitochondrion, peroxisome | 82.76 | 83.05 |
| TraesCS5B01G528100.1 | Wheat | endoplasmic reticulum, plasma membrane | 79.31 | 81.56 |
| TraesCS1A01G407100.1 | Wheat | plastid | 80.69 | 81.25 |
| Zm00001d034795_P002 | Maize | mitochondrion | 80.69 | 80.97 |
| TraesCS5D01G527100.1 | Wheat | golgi, unclear | 80.34 | 80.62 |
| GSMUA_Achr11P... | Banana | unclear | 78.62 | 78.08 |
| GSMUA_Achr8P08390_001 | Banana | mitochondrion | 78.28 | 77.74 |
| KRH29315 | Soybean | endoplasmic reticulum, mitochondrion | 76.21 | 76.47 |
| KRH39037 | Soybean | mitochondrion | 75.86 | 76.12 |
| Solyc12g005500.1.1 | Tomato | plastid | 74.14 | 75.97 |
| KRH24002 | Soybean | mitochondrion | 74.83 | 75.09 |
| PGSC0003DMT400035734 | Potato | cytosol, mitochondrion, plastid | 74.48 | 73.97 |
| PGSC0003DMT400056251 | Potato | cytosol, golgi, mitochondrion | 73.45 | 73.7 |
| Solyc10g008140.2.1 | Tomato | plastid | 73.1 | 73.36 |
| KRH22328 | Soybean | cytosol, mitochondrion | 65.52 | 72.24 |
| HORVU5Hr1G119470.2 | Barley | mitochondrion | 53.45 | 69.51 |
| Os03t0813200-00 | Rice | cytosol, mitochondrion, plasma membrane | 26.9 | 66.1 |
| KRH26997 | Soybean | mitochondrion, nucleus | 75.86 | 65.48 |
| HORVU5Hr1G119700.3 | Barley | mitochondrion, plastid | 64.83 | 64.6 |
| Os03t0814600-00 | Rice | cytosol | 69.66 | 46.87 |
| Os02t0580500-01 | Rice | plasma membrane | 42.76 | 43.97 |
| VIT_16s0100g00070.t01 | Wine grape | cytosol, extracellular, golgi | 9.66 | 39.44 |
| Os04t0462900-02 | Rice | plastid | 39.31 | 38.51 |
Protein Annotations
| Gene3D:3.30.479.30 | MapMan:35.1 | EntrezGene:4334737 | ProteinID:ABF99815.1 | EMBL:AK059289 | EMBL:AK069772 |
| ProteinID:BAF13767.1 | ProteinID:BAS87299.1 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | ncoils:Coil | ProteinID:EEE60274.1 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:Os03g0841700 | EnsemblPlants:Os03t0841700-02 | PFAM:PF01145 |
| PRINTS:PR00679 | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | InterPro:Prohibitin | UniProt:Q10AT9 | SMART:SM00244 |
| SUPFAM:SSF117892 | UniParc:UPI0000DB4F09 | RefSeq:XP_015628387.1 | SEG:seg | : | : |
Description
Similar to Prohibitin. (Os03t0841700-02)
Coordinates
chr3:-:35382746..35385192
Molecular Weight (calculated)
32191.9 Da
IEP (calculated)
10.218
GRAVY (calculated)
-0.256
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFKGAKMPS PPPAAAAGRL VKVGLLGGAA IYAAFNSLYN VEGGHRAIVF NRLEGIKDKV YPEGTHFMIP WFERPIIYDV RARPNLVEST SGSRDLQMVR
101: IGLRVLTRPL PEKLPTIYRS LGENFNERVL PSIIHETLKA VVAQYNASQL ITQREAVSRE IRKILTERAS NFNIALDDVS ITSLSFGKEF THAIEAKQVA
201: AQEAERAKFI VEKAEQDKRS AIIRAQGEAK SAQLIGEAIN NNPAFLALRQ IEAAREISHT MASSNNKVYL DSKDLLLGLQ QLNVDNKNKK
101: IGLRVLTRPL PEKLPTIYRS LGENFNERVL PSIIHETLKA VVAQYNASQL ITQREAVSRE IRKILTERAS NFNIALDDVS ITSLSFGKEF THAIEAKQVA
201: AQEAERAKFI VEKAEQDKRS AIIRAQGEAK SAQLIGEAIN NNPAFLALRQ IEAAREISHT MASSNNKVYL DSKDLLLGLQ QLNVDNKNKK
001: MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
Arabidopsis Description
PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.