Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G528100.1 | Wheat | endoplasmic reticulum, plasma membrane | 73.99 | 58.51 |
| TraesCS5D01G527100.1 | Wheat | golgi, unclear | 73.99 | 57.09 |
| EER90545 | Sorghum | cytosol, mitochondrion, peroxisome | 72.2 | 55.71 |
| Zm00001d034795_P002 | Maize | mitochondrion | 71.3 | 55.02 |
| Os03t0841700-02 | Rice | mitochondrion | 69.51 | 53.45 |
| GSMUA_Achr11P... | Banana | unclear | 68.16 | 52.05 |
| GSMUA_Achr8P08390_001 | Banana | mitochondrion | 67.71 | 51.71 |
| KRH22328 | Soybean | cytosol, mitochondrion | 60.54 | 51.33 |
| KRH29315 | Soybean | endoplasmic reticulum, mitochondrion | 65.92 | 50.87 |
| KRH39037 | Soybean | mitochondrion | 65.92 | 50.87 |
| KRH24002 | Soybean | mitochondrion | 64.57 | 49.83 |
| PGSC0003DMT400035734 | Potato | cytosol, mitochondrion, plastid | 65.02 | 49.66 |
| PGSC0003DMT400056251 | Potato | cytosol, golgi, mitochondrion | 64.13 | 49.48 |
| Solyc10g008140.2.1 | Tomato | plastid | 63.68 | 49.13 |
| Solyc12g005500.1.1 | Tomato | plastid | 62.33 | 49.12 |
| HORVU5Hr1G119700.3 | Barley | mitochondrion, plastid | 62.33 | 47.77 |
| KRH26997 | Soybean | mitochondrion, nucleus | 66.37 | 44.05 |
| HORVU6Hr1G047300.2 | Barley | plasma membrane | 36.32 | 23.41 |
| VIT_16s0100g00070.t01 | Wine grape | cytosol, extracellular, golgi | 1.35 | 4.23 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G119470.2 | EnsemblPlantsGene:HORVU5Hr1G119470 | Gene3D:3.30.479.30 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | InterPro:Prohibitin | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | PFAM:PF01145 | PRINTS:PR00679 |
| SEG:seg | SUPFAM:SSF117892 | UniParc:UPI000B464CEC | UniProt:A0A287SXF8 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr5H:+:655758914..655768705
Molecular Weight (calculated)
24515.7 Da
IEP (calculated)
9.967
GRAVY (calculated)
-0.097
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLRRAPTGL LAPCRFSLQM PIIYATSAHD PISWRAPPGA GGLQMVTSSW CRTLGENYNE RVLPSIIHET LKAVLAQYNA SQLITLREAV SREIRKILTE
101: RAKNFNIALD DVSITSLSFG KEFTHAIEAK QVAAQEAERA KFIVEKAEQD SRSAIIRGQG EVKSAELIGN AIANKPAFVA VTQIEVAREI AHNISASNNK
201: VFLDLRDLLV GLQLPKILGS KKK
101: RAKNFNIALD DVSITSLSFG KEFTHAIEAK QVAAQEAERA KFIVEKAEQD SRSAIIRGQG EVKSAELIGN AIANKPAFVA VTQIEVAREI AHNISASNNK
201: VFLDLRDLLV GLQLPKILGS KKK
001: MVPWFERPII YDVRARPYLV ESTTGSHDLQ MVKIGLRVLT RPMGDRLPQI YRTLGENYSE RVLPSIIHET LKAVVAQYNA SQLITQREAV SREIRKILTE
101: RASNFDIALD DVSITTLTFG KEFTAAIEAK QVAAQEAERA KFIVEKAEQD RRSAVIRAQG EAKSAQLIGQ AIANNQAFIT LRKIEAAREI AQTIAQSANK
201: VYLSSNDLLL NLQEMNLEPK K
101: RASNFDIALD DVSITTLTFG KEFTAAIEAK QVAAQEAERA KFIVEKAEQD RRSAVIRAQG EAKSAQLIGQ AIANNQAFIT LRKIEAAREI AQTIAQSANK
201: VYLSSNDLLL NLQEMNLEPK K
Arabidopsis Description
PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.