Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d019341_P001 | Maize | mitochondrion | 37.07 | 46.24 |
| GSMUA_Achr11P... | Banana | unclear | 54.31 | 21.58 |
| GSMUA_Achr8P08390_001 | Banana | mitochondrion | 53.45 | 21.23 |
| GSMUA_Achr7P03130_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 52.59 | 21.03 |
| KRH22328 | Soybean | cytosol, mitochondrion | 45.69 | 20.15 |
| KRH24002 | Soybean | mitochondrion | 50.0 | 20.07 |
| KRH29315 | Soybean | endoplasmic reticulum, mitochondrion | 48.28 | 19.38 |
| KRH39037 | Soybean | mitochondrion | 48.28 | 19.38 |
| GSMUA_Achr3P21940_001 | Banana | mitochondrion | 34.48 | 18.96 |
| KRH26997 | Soybean | mitochondrion, nucleus | 49.14 | 16.96 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 26.72 | 12.2 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 6.03 | 2.29 |
| GSMUA_Achr6P12790_001 | Banana | golgi | 2.59 | 1.25 |
| VIT_16s0100g00070.t01 | Wine grape | cytosol, extracellular, golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P12800_001 | EnsemblPlants:GSMUA_Achr6T12800_001 | EnsemblPlantsGene:GSMUA_Achr6G12800_001 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Prohibitin |
| ncoils:Coil | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | PRINTS:PR00679 | SEG:seg | UniParc:UPI00029557BE |
| UniProt:M0T6H8 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G12800_001]
Coordinates
chr6:+:8564585..8565846
Molecular Weight (calculated)
12574.3 Da
IEP (calculated)
7.924
GRAVY (calculated)
0.008
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MQCQPADHTK GGMLDIVRKG IFFSVNRYVD DTEALVGTEA KQVAAQEAEQ AKFIVEKAEQ DKKCAIIRAQ GAQLIGQAIA KNPAFLALRR IEAATEVAQK
101: IAYSANLAML SLMSCC
101: IAYSANLAML SLMSCC
001: MNVKKVPNVP GSPALSALLK LGVIGGLGLY CIGSSMYNVD GGHRAIVFNR FTGIKDRVYP EGTHFKIPLF ERAIIYDVRS RPYVENSQTG SNDLQTVTIG
101: LRVLTRPMGD RLPEIYRTLG QNYGERVLPS IINETLKAVV AQYNASHLIT QREAVSREIR KIVTERAAKF NIALDDVSIT NLKFGKEFTE AIEKKQVAAQ
201: EAERAKFIVE KAEQDKKSAI IRAQGEAKSA QLIGQAIANN EAFITLRKIE AAREIAQTIA KSANKVYLNS SDLLISKQ
101: LRVLTRPMGD RLPEIYRTLG QNYGERVLPS IINETLKAVV AQYNASHLIT QREAVSREIR KIVTERAAKF NIALDDVSIT NLKFGKEFTE AIEKKQVAAQ
201: EAERAKFIVE KAEQDKKSAI IRAQGEAKSA QLIGQAIANN EAFITLRKIE AAREIAQTIA KSANKVYLNS SDLLISKQ
Arabidopsis Description
PHB7Prohibitin-7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH5]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.