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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, secretory
iPSORT:secretory
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:mitochondrion
 mitochondrion: 23895732
golgi: 25769308
unclear: 25769308
mitochondrion: 26136264
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 23895732 doi
RP Jacoby, AH Millar, NL Taylor
ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G325800.1 Wheat cytosol 99.65 99.65
TraesCS2B01G344800.1 Wheat golgi 99.65 99.65
Zm00001d025619_P001 Maize mitochondrion 92.98 93.31
EES12301 Sorghum plastid 92.98 93.31
Os04t0462900-02 Rice plastid 87.37 84.12
VIT_14s0171g00430.t01 Wine grape plastid 79.3 79.86
GSMUA_Achr3P20260_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 70.88 79.53
Bra039086.1-P Field mustard plastid 76.84 78.78
CDY00161 Canola plastid 76.84 78.78
CDY20055 Canola plastid 76.84 78.78
CDX83674 Canola plastid 76.49 78.42
CDY13700 Canola plastid 76.49 78.42
PGSC0003DMT400074656 Potato plastid 75.79 78.26
Bra025263.1-P Field mustard plastid 76.14 78.06
KRH44804 Soybean mitochondrion 76.14 77.5
CDY36378 Canola cytosol 75.09 77.26
CDY11712 Canola cytosol 75.09 77.26
CDX67477 Canola extracellular 75.09 77.26
CDY42555 Canola cytosol 75.09 77.26
Bra025548.1-P Field mustard cytosol 75.09 77.26
Bra028475.1-P Field mustard extracellular 75.09 77.26
PGSC0003DMT400041811 Potato plastid 75.44 77.06
KRH56323 Soybean mitochondrion 75.09 76.7
Solyc11g010190.1.1 Tomato nucleus 75.09 76.7
AT5G40770.1 Thale cress extracellular, plastid 74.04 76.17
AT3G27280.2 Thale cress cytosol 74.04 75.63
KRH62783 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 73.68 75.27
PGSC0003DMT400043286 Potato extracellular, plasma membrane 72.63 74.46
Solyc05g051510.2.1 Tomato nucleus 72.28 74.37
TraesCS6A01G198500.1 Wheat mitochondrion 80.0 72.38
Solyc11g013260.1.1 Tomato plastid 76.14 72.09
AT5G14300.1 Thale cress endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 57.19 65.46
GSMUA_Achr7P18670_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 50.18 46.73
TraesCS1A01G407100.1 Wheat plastid 43.16 42.71
TraesCS4A01G344900.1 Wheat mitochondrion, plastid 31.23 33.21
TraesCS4A01G346300.1 Wheat mitochondrion, plastid 24.91 24.32
Protein Annotations
EnsemblPlants:TraesCS2A01G337100.1EnsemblPlantsGene:TraesCS2A01G337100GO:GO:0005575GO:GO:0016020InterPro:Band_7InterPro:Band_7/SPFH_dom_sf
InterPro:Prohibitinncoils:CoilPANTHER:PTHR23222PANTHER:PTHR23222:SF3PFAM:PF01145PRINTS:PR00679
SEG:segSMART:SM00244SUPFAM:SSF117892TIGR:cd03401MapMan:19.4.5.8.1.2.2:
Description
No Description!
Coordinates
chr2A:+:570724213..570725070
Molecular Weight (calculated)
30644.7 Da
IEP (calculated)
6.982
GRAVY (calculated)
-0.001
Length
285 amino acids
Sequence
(BLAST)
001: MSGGPAAVSF LTNIAKAAAG LGAAASLLSA SLYTVDGGER AVVFDRFRGV LPETVGEGTH FIVPWLQKPY IFDIRTRPHN FSSNSGTKDL QMVNLTLRLL
101: SRPDVVNLPT IFTSLGLEYD DKVLPSIGNE VLKAVVAQFN ADQLLTDRPH VSALVRDSLI KRAREFNIIL DDVAITHLSY GADFSQAVEK KQVAQQEAER
201: SKFLVAKAEQ ERRAAIVRAE GESESARLIS EATAIAGTGL IELRRIEAAK EIAAELARSP NVAYIPSGDN GKMLLGLNAA GFGGR
Best Arabidopsis Sequence Match ( AT5G40770.1 )
(BLAST)
001: MGSQQAAVSF LSNLAKAAFG LGTAATVLNT SLFTVDGGER AVIFDRFRGV MDQTVGEGTH FLIPILQRPH IFDIRTKPHT FSSISGTKDL QMVNLTLRVL
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
Arabidopsis Description
PHB3Prohibitin-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04331]
SUBAcon: [plastid,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.