Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13700 | Canola | plastid | 98.92 | 98.92 |
| Bra025263.1-P | Field mustard | plastid | 98.56 | 98.56 |
| CDY00161 | Canola | plastid | 97.84 | 97.84 |
| CDY20055 | Canola | plastid | 97.84 | 97.84 |
| AT3G27280.2 | Thale cress | cytosol | 92.09 | 91.76 |
| CDY42555 | Canola | cytosol | 90.29 | 90.61 |
| CDY36378 | Canola | cytosol | 90.29 | 90.61 |
| CDY11712 | Canola | cytosol | 90.29 | 90.61 |
| CDX67477 | Canola | extracellular | 89.57 | 89.89 |
| KRH44804 | Soybean | mitochondrion | 84.17 | 83.57 |
| Solyc11g010190.1.1 | Tomato | nucleus | 83.81 | 83.51 |
| PGSC0003DMT400041811 | Potato | plastid | 83.81 | 83.51 |
| KRH56323 | Soybean | mitochondrion | 83.09 | 82.8 |
| KRH62783 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 82.73 | 82.44 |
| VIT_14s0171g00430.t01 | Wine grape | plastid | 83.45 | 81.98 |
| PGSC0003DMT400074656 | Potato | plastid | 81.3 | 81.88 |
| PGSC0003DMT400043286 | Potato | extracellular, plasma membrane | 80.58 | 80.58 |
| Solyc05g051510.2.1 | Tomato | nucleus | 79.5 | 79.78 |
| EES12301 | Sorghum | plastid | 78.42 | 76.76 |
| TraesCS2A01G337100.1 | Wheat | mitochondrion | 78.42 | 76.49 |
| TraesCS2D01G325800.1 | Wheat | cytosol | 78.42 | 76.49 |
| TraesCS2B01G344800.1 | Wheat | golgi | 78.06 | 76.14 |
| Solyc11g013260.1.1 | Tomato | plastid | 82.37 | 76.08 |
| Zm00001d025619_P001 | Maize | mitochondrion | 77.7 | 76.06 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 69.42 | 75.98 |
| EES07043 | Sorghum | mitochondrion | 74.82 | 73.76 |
| Os02t0580500-01 | Rice | plasma membrane | 73.74 | 72.69 |
| Zm00001d016979_P001 | Maize | mitochondrion | 73.38 | 72.34 |
| TraesCS6B01G228900.1 | Wheat | unclear | 71.58 | 70.57 |
| TraesCS6D01G225000.1 | Wheat | mitochondrion | 71.22 | 70.21 |
| TraesCS6B01G281500.1 | Wheat | mitochondrion | 70.86 | 69.86 |
| Os04t0462900-02 | Rice | plastid | 74.1 | 69.59 |
| TraesCS6A01G198500.1 | Wheat | mitochondrion | 71.94 | 63.49 |
| TraesCS6D01G185000.1 | Wheat | mitochondrion | 71.58 | 63.17 |
| HORVU6Hr1G047300.2 | Barley | plasma membrane | 71.58 | 57.51 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 49.64 | 45.1 |
| CDY14238 | Canola | cytosol | 38.13 | 43.8 |
| CDY35195 | Canola | cytosol, mitochondrion, plastid | 44.96 | 43.1 |
| CDY38382 | Canola | cytosol, mitochondrion, plastid | 44.96 | 43.1 |
| CDY10095 | Canola | golgi | 43.53 | 42.01 |
| CDY32517 | Canola | golgi | 43.53 | 42.01 |
| CDY15478 | Canola | endoplasmic reticulum | 43.17 | 41.67 |
| CDY18191 | Canola | endoplasmic reticulum | 42.81 | 41.32 |
| CDX89860 | Canola | endoplasmic reticulum | 42.81 | 41.32 |
| CDX97444 | Canola | cytosol, mitochondrion, plastid | 37.41 | 40.0 |
| CDX86666 | Canola | mitochondrion | 43.53 | 39.54 |
Protein Annotations
| EnsemblPlants:CDX83674 | EnsemblPlantsGene:GSBRNA2T00139378001 | GO:A0A078D5R9 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 |
| InterPro:Band_7/SPFH_dom_sf | InterPro:Prohibitin | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF9 | PFAM:PF01145 | PRINTS:PR00679 |
| ProteinID:CDX83674 | ProteinID:CDX83674.1 | SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 | UniParc:UPI0004EB3CDB |
| MapMan:19.4.5.8.1.2.2 | : | : | : | : | : |
Description
BnaC07g24140D
Coordinates
chrLK031833:+:1551897..1553562
Molecular Weight (calculated)
30369.5 Da
IEP (calculated)
7.890
GRAVY (calculated)
-0.028
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQAAVSFL TNLAKAAFGL GVSATVLSSS LYTVDGGERA VLFDRFRGVL DQTVGEGTHF LIPILQRPHI FDIRTKPHTF SSVSGTKDLQ MVHLTLRVLS
101: RPEVSRLPTI FQTLGLEYDD KVLPSIGNEV LKAVVAQFNA DQLLTERPQV SALVRDSLIK RARDFNIELD DVAITHLSYG MEFSRAVEAK QVAQQEAERS
201: KFVVMKADQE RRAAVIRAEG ESEAAQLISD ATAKAGMGLI ELRRIEASRE VAATLARSPN VAYLPGGQSM LFNLNAGR
101: RPEVSRLPTI FQTLGLEYDD KVLPSIGNEV LKAVVAQFNA DQLLTERPQV SALVRDSLIK RARDFNIELD DVAITHLSYG MEFSRAVEAK QVAQQEAERS
201: KFVVMKADQE RRAAVIRAEG ESEAAQLISD ATAKAGMGLI ELRRIEASRE VAATLARSPN VAYLPGGQSM LFNLNAGR
001: MGSQQVAISF LTNLAKAAFG LGVAATALNS SLYTVDGGER AVLFDRFRGV LDQTVGEGTH FLIPYLQTPH IYDIRTKPHT FSSKSGTKDL QMVNLTLRVL
101: FRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVANFN ADQLLTERPQ VSALVRDALI KRAREFNIEL DDIAITHLSY GAEFSRAVEA KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EVAATLARSP NVAYLPGGQS MLFNLNPGR
101: FRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVANFN ADQLLTERPQ VSALVRDALI KRAREFNIEL DDIAITHLSY GAEFSRAVEA KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EVAATLARSP NVAYLPGGQS MLFNLNPGR
Arabidopsis Description
PHB4Prohibitin-4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LK25]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.