Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016979_P001 | Maize | mitochondrion | 94.33 | 94.33 |
| Os02t0580500-01 | Rice | plasma membrane | 87.94 | 87.94 |
| TraesCS6B01G228900.1 | Wheat | unclear | 85.46 | 85.46 |
| TraesCS6D01G225000.1 | Wheat | mitochondrion | 85.11 | 85.11 |
| TraesCS6B01G281500.1 | Wheat | mitochondrion | 84.4 | 84.4 |
| EES12301 | Sorghum | plastid | 83.69 | 83.1 |
| Bra028475.1-P | Field mustard | extracellular | 75.18 | 76.53 |
| TraesCS6D01G185000.1 | Wheat | mitochondrion | 85.11 | 76.19 |
| TraesCS6A01G198500.1 | Wheat | mitochondrion | 85.11 | 76.19 |
| CDY11712 | Canola | cytosol | 74.82 | 76.17 |
| Bra025548.1-P | Field mustard | cytosol | 74.82 | 76.17 |
| CDY36378 | Canola | cytosol | 74.82 | 76.17 |
| CDY42555 | Canola | cytosol | 74.82 | 76.17 |
| Solyc11g010190.1.1 | Tomato | nucleus | 75.18 | 75.99 |
| Bra025263.1-P | Field mustard | plastid | 74.82 | 75.9 |
| AT5G40770.1 | Thale cress | extracellular, plastid | 74.47 | 75.81 |
| CDX67477 | Canola | extracellular | 74.47 | 75.81 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 68.09 | 75.59 |
| Bra039086.1-P | Field mustard | plastid | 74.47 | 75.54 |
| CDY00161 | Canola | plastid | 74.47 | 75.54 |
| CDY20055 | Canola | plastid | 74.47 | 75.54 |
| CDY13700 | Canola | plastid | 74.47 | 75.54 |
| PGSC0003DMT400074656 | Potato | plastid | 73.76 | 75.36 |
| PGSC0003DMT400041811 | Potato | plastid | 74.47 | 75.27 |
| VIT_14s0171g00430.t01 | Wine grape | plastid | 75.53 | 75.27 |
| CDX83674 | Canola | plastid | 73.76 | 74.82 |
| KRH56323 | Soybean | mitochondrion | 73.76 | 74.55 |
| PGSC0003DMT400043286 | Potato | extracellular, plasma membrane | 72.69 | 73.74 |
| Solyc05g051510.2.1 | Tomato | nucleus | 71.99 | 73.29 |
| KRH62783 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 72.34 | 73.12 |
| AT3G27280.2 | Thale cress | cytosol | 71.99 | 72.76 |
| KRH44804 | Soybean | mitochondrion | 71.63 | 72.14 |
| HORVU6Hr1G047300.2 | Barley | plasma membrane | 85.46 | 69.65 |
| Solyc11g013260.1.1 | Tomato | plastid | 73.4 | 68.77 |
| AT5G14300.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 54.61 | 61.85 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 47.87 | 44.12 |
| EER98334 | Sorghum | mitochondrion | 42.2 | 41.18 |
| EER90545 | Sorghum | cytosol, mitochondrion, peroxisome | 41.84 | 40.83 |
Protein Annotations
| MapMan:19.4.5.8.1.2.2 | EntrezGene:8055406 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | UniProt:C5XVS3 | ncoils:Coil |
| EnsemblPlants:EES07043 | ProteinID:EES07043 | ProteinID:EES07043.1 | GO:GO:0005575 | GO:GO:0016020 | PFAM:PF01145 |
| PRINTS:PR00679 | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF3 | InterPro:Prohibitin | SMART:SM00244 | EnsemblPlantsGene:SORBI_3004G192800 |
| SUPFAM:SSF117892 | unigene:Sbi.18458 | SignalP:SignalP-noTM | UniParc:UPI0001A85D4F | RefSeq:XP_002454067.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:-:54465452..54466993
Molecular Weight (calculated)
30437.4 Da
IEP (calculated)
6.697
GRAVY (calculated)
-0.057
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGQAAVS FLTRMAAAAA GLGLAASAAS TSFYTVDGGE RAVIFDRVRG VLPQTTSEGT HFLVPILQKP FIFDIRTRPH SFSSTSGTKD LQMVNLTLRV
101: LSRPDVEHLP DIFNSLGLEY DEKVLPSIGN EVLKAVVAQF NADQLLTERP HVSALVRESL TQRAREFNIV LDDVAITHLA YGPEFSQAVE KKQVAQQEAE
201: RSRFLVARAE QERRAAIVRA EGESEAARLI SEATTTAGNG LIELRRIEAA KEIAGVLART PNVSYIPAGN NGQMLLGLNA AR
101: LSRPDVEHLP DIFNSLGLEY DEKVLPSIGN EVLKAVVAQF NADQLLTERP HVSALVRESL TQRAREFNIV LDDVAITHLA YGPEFSQAVE KKQVAQQEAE
201: RSRFLVARAE QERRAAIVRA EGESEAARLI SEATTTAGNG LIELRRIEAA KEIAGVLART PNVSYIPAGN NGQMLLGLNA AR
001: MGSQQAAVSF LSNLAKAAFG LGTAATVLNT SLFTVDGGER AVIFDRFRGV MDQTVGEGTH FLIPILQRPH IFDIRTKPHT FSSISGTKDL QMVNLTLRVL
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
Arabidopsis Description
PHB3Prohibitin-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04331]
SUBAcon: [plastid,extracellular]
SUBAcon: [plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.