Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42555 | Canola | cytosol | 96.75 | 96.75 |
| CDY36378 | Canola | cytosol | 96.75 | 96.75 |
| CDY11712 | Canola | cytosol | 96.75 | 96.75 |
| Bra025548.1-P | Field mustard | cytosol | 96.75 | 96.75 |
| CDX67477 | Canola | extracellular | 96.03 | 96.03 |
| Bra028475.1-P | Field mustard | extracellular | 95.67 | 95.67 |
| AT3G27280.2 | Thale cress | cytosol | 89.53 | 88.89 |
| PGSC0003DMT400041811 | Potato | plastid | 85.2 | 84.59 |
| VIT_14s0171g00430.t01 | Wine grape | plastid | 85.92 | 84.1 |
| Solyc11g010190.1.1 | Tomato | nucleus | 83.75 | 83.15 |
| KRH44804 | Soybean | mitochondrion | 82.67 | 81.79 |
| KRH56323 | Soybean | mitochondrion | 82.31 | 81.72 |
| KRH62783 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 81.59 | 81.0 |
| PGSC0003DMT400043286 | Potato | extracellular, plasma membrane | 81.23 | 80.94 |
| PGSC0003DMT400074656 | Potato | plastid | 80.14 | 80.43 |
| Solyc05g051510.2.1 | Tomato | nucleus | 80.14 | 80.14 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 70.04 | 76.38 |
| EES12301 | Sorghum | plastid | 76.9 | 75.0 |
| EES07043 | Sorghum | mitochondrion | 75.81 | 74.47 |
| Solyc11g013260.1.1 | Tomato | plastid | 80.87 | 74.42 |
| Zm00001d025619_P001 | Maize | mitochondrion | 76.17 | 74.3 |
| TraesCS2D01G325800.1 | Wheat | cytosol | 76.17 | 74.04 |
| TraesCS2A01G337100.1 | Wheat | mitochondrion | 76.17 | 74.04 |
| TraesCS2B01G344800.1 | Wheat | golgi | 75.81 | 73.68 |
| Os02t0580500-01 | Rice | plasma membrane | 74.37 | 73.05 |
| Zm00001d016979_P001 | Maize | mitochondrion | 73.65 | 72.34 |
| TraesCS6B01G228900.1 | Wheat | unclear | 71.84 | 70.57 |
| TraesCS6D01G225000.1 | Wheat | mitochondrion | 71.48 | 70.21 |
| TraesCS6B01G281500.1 | Wheat | mitochondrion | 71.12 | 69.86 |
| AT5G14300.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 62.09 | 69.08 |
| Os04t0462900-02 | Rice | plastid | 71.84 | 67.23 |
| TraesCS6A01G198500.1 | Wheat | mitochondrion | 72.2 | 63.49 |
| TraesCS6D01G185000.1 | Wheat | mitochondrion | 71.84 | 63.17 |
| HORVU6Hr1G047300.2 | Barley | plasma membrane | 72.2 | 57.8 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 48.38 | 43.79 |
| AT1G03860.3 | Thale cress | endoplasmic reticulum | 43.32 | 41.96 |
| AT2G20530.2 | Thale cress | cytosol, mitochondrion, plastid | 42.96 | 41.61 |
| AT5G44140.1 | Thale cress | golgi | 41.16 | 41.01 |
| AT4G28510.1 | Thale cress | cytosol, mitochondrion, plastid | 42.6 | 40.97 |
Protein Annotations
| MapMan:19.4.5.8.1.2.2 | EntrezGene:834077 | UniProt:A0A178UKZ2 | ProteinID:AED94592.1 | ArrayExpress:AT5G40770 | EnsemblPlantsGene:AT5G40770 |
| RefSeq:AT5G40770 | TAIR:AT5G40770 | RefSeq:AT5G40770-TAIR-G | EnsemblPlants:AT5G40770.1 | TAIR:AT5G40770.1 | Symbol:ATPHB3 |
| EMBL:AY054499 | EMBL:AY087641 | EMBL:AY114631 | ProteinID:BAB08838.1 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005747 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 |
| GO:GO:0006950 | GO:GO:0007005 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009733 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0048527 | GO:GO:0051301 |
| GO:GO:0051782 | GO:GO:0071731 | RefSeq:NP_198893.1 | UniProt:O04331 | ProteinID:OAO94468.1 | PFAM:PF01145 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000017 | PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000282 | PO:PO:0000293 | PO:PO:0000351 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0002000 | PO:PO:0004507 | PO:PO:0006085 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00679 | PANTHER:PTHR23222 |
| PANTHER:PTHR23222:SF9 | InterPro:Prohibitin | SMART:SM00244 | SUPFAM:SSF117892 | EMBL:U66593 | EMBL:U69155 |
| UniParc:UPI00000A6F1C | SEG:seg | : | : | : | : |
Description
PHB3Prohibitin-3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04331]
Coordinates
chr5:-:16314850..16317291
Molecular Weight (calculated)
30401.6 Da
IEP (calculated)
7.889
GRAVY (calculated)
-0.013
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQQAAVSF LSNLAKAAFG LGTAATVLNT SLFTVDGGER AVIFDRFRGV MDQTVGEGTH FLIPILQRPH IFDIRTKPHT FSSISGTKDL QMVNLTLRVL
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
101: SRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY GVEFSRAVEQ KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.