Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 4
- extracellular 3
- vacuole 2
- plasma membrane 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G03860.3 | Thale cress | endoplasmic reticulum | 80.58 | 78.32 |
| AT4G28510.1 | Thale cress | cytosol, mitochondrion, plastid | 79.5 | 76.74 |
| KRH39037 | Soybean | mitochondrion | 77.7 | 74.74 |
| KRH22328 | Soybean | cytosol, mitochondrion | 69.42 | 73.38 |
| Solyc10g008140.2.1 | Tomato | plastid | 75.54 | 72.66 |
| KRH24002 | Soybean | mitochondrion | 75.54 | 72.66 |
| AT2G20530.2 | Thale cress | cytosol, mitochondrion, plastid | 74.46 | 72.38 |
| PGSC0003DMT400056251 | Potato | cytosol, golgi, mitochondrion | 74.82 | 71.97 |
| KRH29315 | Soybean | endoplasmic reticulum, mitochondrion | 74.46 | 71.63 |
| PGSC0003DMT400035734 | Potato | cytosol, mitochondrion, plastid | 72.3 | 68.84 |
| Solyc12g005500.1.1 | Tomato | plastid | 67.27 | 66.08 |
| KRH26997 | Soybean | mitochondrion, nucleus | 77.34 | 63.99 |
| Os03t0813200-00 | Rice | cytosol, mitochondrion, plasma membrane | 20.86 | 49.15 |
| AT5G40770.1 | Thale cress | extracellular, plastid | 41.01 | 41.16 |
| AT3G27280.2 | Thale cress | cytosol | 41.01 | 40.86 |
| AT5G14300.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 35.61 | 39.76 |
| GSMUA_Achr6P12790_001 | Banana | golgi | 21.58 | 25.0 |
Protein Annotations
| Gene3D:3.30.479.30 | MapMan:35.1 | EntrezGene:834437 | ProteinID:AED95066.1 | ArrayExpress:AT5G44140 | EnsemblPlantsGene:AT5G44140 |
| RefSeq:AT5G44140 | TAIR:AT5G44140 | RefSeq:AT5G44140-TAIR-G | EnsemblPlants:AT5G44140.1 | TAIR:AT5G44140.1 | Symbol:ATPHB7 |
| Unigene:At.55347 | ProteinID:BAB10981.1 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005747 | GO:GO:0009506 |
| GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_199227.1 | PFAM:PF01145 | PO:PO:0000293 | PO:PO:0009025 |
| PRINTS:PR00679 | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | InterPro:Prohibitin | UniProt:Q9FFH5 | SMART:SM00244 |
| SUPFAM:SSF117892 | TMHMM:TMhelix | UniParc:UPI00000A4AD9 | SEG:seg | : | : |
Description
PHB7Prohibitin-7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH5]
Coordinates
chr5:+:17762491..17763666
Molecular Weight (calculated)
30761.2 Da
IEP (calculated)
10.178
GRAVY (calculated)
-0.210
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVKKVPNVP GSPALSALLK LGVIGGLGLY CIGSSMYNVD GGHRAIVFNR FTGIKDRVYP EGTHFKIPLF ERAIIYDVRS RPYVENSQTG SNDLQTVTIG
101: LRVLTRPMGD RLPEIYRTLG QNYGERVLPS IINETLKAVV AQYNASHLIT QREAVSREIR KIVTERAAKF NIALDDVSIT NLKFGKEFTE AIEKKQVAAQ
201: EAERAKFIVE KAEQDKKSAI IRAQGEAKSA QLIGQAIANN EAFITLRKIE AAREIAQTIA KSANKVYLNS SDLLISKQ
101: LRVLTRPMGD RLPEIYRTLG QNYGERVLPS IINETLKAVV AQYNASHLIT QREAVSREIR KIVTERAAKF NIALDDVSIT NLKFGKEFTE AIEKKQVAAQ
201: EAERAKFIVE KAEQDKKSAI IRAQGEAKSA QLIGQAIANN EAFITLRKIE AAREIAQTIA KSANKVYLNS SDLLISKQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.