Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 65.46 | 64.17 |
| KRH62783 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 70.68 | 63.08 |
| AT5G40770.1 | Thale cress | extracellular, plastid | 69.08 | 62.09 |
| KRH56323 | Soybean | mitochondrion | 69.48 | 62.01 |
| AT3G27280.2 | Thale cress | cytosol | 69.08 | 61.65 |
| PGSC0003DMT400074656 | Potato | plastid | 67.47 | 60.87 |
| KRH44804 | Soybean | mitochondrion | 67.87 | 60.36 |
| PGSC0003DMT400041811 | Potato | plastid | 67.07 | 59.86 |
| PGSC0003DMT400043286 | Potato | extracellular, plasma membrane | 66.67 | 59.71 |
| Solyc05g051510.2.1 | Tomato | nucleus | 66.27 | 59.57 |
| Solyc11g010190.1.1 | Tomato | nucleus | 65.46 | 58.42 |
| VIT_14s0171g00430.t01 | Wine grape | plastid | 65.86 | 57.95 |
| Zm00001d025619_P001 | Maize | mitochondrion | 65.86 | 57.75 |
| EES12301 | Sorghum | plastid | 65.46 | 57.39 |
| TraesCS2B01G344800.1 | Wheat | golgi | 65.46 | 57.19 |
| TraesCS2A01G337100.1 | Wheat | mitochondrion | 65.46 | 57.19 |
| TraesCS2D01G325800.1 | Wheat | cytosol | 65.06 | 56.84 |
| Os02t0580500-01 | Rice | plasma membrane | 63.45 | 56.03 |
| Solyc11g013260.1.1 | Tomato | plastid | 67.07 | 55.48 |
| TraesCS6B01G228900.1 | Wheat | unclear | 62.65 | 55.32 |
| Zm00001d016979_P001 | Maize | mitochondrion | 62.65 | 55.32 |
| TraesCS6D01G225000.1 | Wheat | mitochondrion | 62.25 | 54.96 |
| EES07043 | Sorghum | mitochondrion | 61.85 | 54.61 |
| TraesCS6B01G281500.1 | Wheat | mitochondrion | 61.85 | 54.61 |
| Os04t0462900-02 | Rice | plastid | 60.24 | 50.68 |
| TraesCS6A01G198500.1 | Wheat | mitochondrion | 62.65 | 49.52 |
| TraesCS6D01G185000.1 | Wheat | mitochondrion | 62.65 | 49.52 |
| HORVU6Hr1G047300.2 | Barley | plasma membrane | 63.05 | 45.38 |
| AT2G20530.2 | Thale cress | cytosol, mitochondrion, plastid | 42.17 | 36.71 |
| AT5G44140.1 | Thale cress | golgi | 39.76 | 35.61 |
| AT1G03860.3 | Thale cress | endoplasmic reticulum | 40.56 | 35.31 |
| AT4G28510.1 | Thale cress | cytosol, mitochondrion, plastid | 40.56 | 35.07 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 42.17 | 34.31 |
Protein Annotations
| MapMan:35.1 | EntrezGene:831280 | ProteinID:AED92014.1 | ArrayExpress:AT5G14300 | EnsemblPlantsGene:AT5G14300 | RefSeq:AT5G14300 |
| TAIR:AT5G14300 | RefSeq:AT5G14300-TAIR-G | EnsemblPlants:AT5G14300.1 | TAIR:AT5G14300.1 | Symbol:ATPHB5 | Unigene:At.54842 |
| InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | ProteinID:CAB87769.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_196934.1 |
| PFAM:PF01145 | PRINTS:PR00679 | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF9 | InterPro:Prohibitin | UniProt:Q9LY99 |
| SMART:SM00244 | SUPFAM:SSF117892 | SignalP:SignalP-noTM | UniParc:UPI00000A3B46 | SEG:seg | : |
Description
PHB5Prohibitin-5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LY99]
Coordinates
chr5:+:4613102..4614023
Molecular Weight (calculated)
27393.4 Da
IEP (calculated)
10.434
GRAVY (calculated)
-0.078
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MPWSKFTKVA LGLGAAIAAV RSTMFTVDGG QRAVMFHRFE GILEEPVGEG THRKIPWVQK PYIFDIRTKP YKINTDSGTK DLQMVNLTLR VMFRPDVVKA
101: VVAQFNADEL LTERPQVSAL IRETLIKRAK EFNIVLDDVS ITGLSYGKEF SLAVERKQVA QQEAERSKFV VAKADQERRA AVIRAEGESE AARVISKATA
201: GAGMGLIKLR RVEAAREVAI TLSNSPNVVY LPSGGNMLFA MNGPSKVVA
101: VVAQFNADEL LTERPQVSAL IRETLIKRAK EFNIVLDDVS ITGLSYGKEF SLAVERKQVA QQEAERSKFV VAKADQERRA AVIRAEGESE AARVISKATA
201: GAGMGLIKLR RVEAAREVAI TLSNSPNVVY LPSGGNMLFA MNGPSKVVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.