Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G337100.1 | Wheat | mitochondrion | 99.65 | 99.65 |
| TraesCS2D01G325800.1 | Wheat | cytosol | 99.3 | 99.3 |
| Zm00001d025619_P001 | Maize | mitochondrion | 92.63 | 92.96 |
| EES12301 | Sorghum | plastid | 92.63 | 92.96 |
| Os04t0462900-02 | Rice | plastid | 87.02 | 83.78 |
| TraesCS6B01G228900.1 | Wheat | unclear | 79.3 | 80.14 |
| VIT_14s0171g00430.t01 | Wine grape | plastid | 79.3 | 79.86 |
| GSMUA_Achr3P20260_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 70.88 | 79.53 |
| TraesCS6B01G281500.1 | Wheat | mitochondrion | 78.6 | 79.43 |
| CDY00161 | Canola | plastid | 76.49 | 78.42 |
| CDY20055 | Canola | plastid | 76.49 | 78.42 |
| Bra039086.1-P | Field mustard | plastid | 76.49 | 78.42 |
| PGSC0003DMT400074656 | Potato | plastid | 75.79 | 78.26 |
| CDY13700 | Canola | plastid | 76.14 | 78.06 |
| CDX83674 | Canola | plastid | 76.14 | 78.06 |
| Bra025263.1-P | Field mustard | plastid | 75.79 | 77.7 |
| KRH44804 | Soybean | mitochondrion | 76.14 | 77.5 |
| PGSC0003DMT400041811 | Potato | plastid | 75.44 | 77.06 |
| CDY11712 | Canola | cytosol | 74.74 | 76.9 |
| Bra025548.1-P | Field mustard | cytosol | 74.74 | 76.9 |
| Bra028475.1-P | Field mustard | extracellular | 74.74 | 76.9 |
| CDX67477 | Canola | extracellular | 74.74 | 76.9 |
| CDY42555 | Canola | cytosol | 74.74 | 76.9 |
| CDY36378 | Canola | cytosol | 74.74 | 76.9 |
| KRH56323 | Soybean | mitochondrion | 75.09 | 76.7 |
| Solyc11g010190.1.1 | Tomato | nucleus | 75.09 | 76.7 |
| AT5G40770.1 | Thale cress | extracellular, plastid | 73.68 | 75.81 |
| KRH62783 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 73.68 | 75.27 |
| AT3G27280.2 | Thale cress | cytosol | 73.68 | 75.27 |
| PGSC0003DMT400043286 | Potato | extracellular, plasma membrane | 72.63 | 74.46 |
| Solyc05g051510.2.1 | Tomato | nucleus | 72.28 | 74.37 |
| Solyc11g013260.1.1 | Tomato | plastid | 76.14 | 72.09 |
| AT5G14300.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 57.19 | 65.46 |
| GSMUA_Achr7P18670_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 50.18 | 46.73 |
| TraesCS5B01G528100.1 | Wheat | endoplasmic reticulum, plasma membrane | 42.11 | 42.55 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G344800.1 | EnsemblPlantsGene:TraesCS2B01G344800 | GO:GO:0005575 | GO:GO:0016020 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf |
| InterPro:Prohibitin | ncoils:Coil | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF3 | PFAM:PF01145 | PRINTS:PR00679 |
| SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 | TIGR:cd03401 | MapMan:19.4.5.8.1.2.2 | : |
Description
No Description!
Coordinates
chr2B:-:491354251..491355108
Molecular Weight (calculated)
30591.7 Da
IEP (calculated)
6.535
GRAVY (calculated)
0.023
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGPAAVSF LTNIAKAAAG LGAAASLLSA SLYTVDGGER AVVFDRFRGV LPETVGEGTH FIVPWLQKPY IFDIRTRPHN FSSNSGTKDL QMVNLTLRLL
101: SRPDVVNLPT IFTSLGLEYD DKVLPSIGNE VLKAVVAQFN ADQLLTDRPH VSALVRDSLI KRAREFNIIL DDVAITHLSY GADFSQAVEK KQVAQQEAER
201: SKFLVAKAEQ ERRAAIVRAE GESESARLIS EATAIAGTGL IELRRIEAAK EIAAELACSP NVAYIPSGDN GKMLLGLNAA GFGGR
101: SRPDVVNLPT IFTSLGLEYD DKVLPSIGNE VLKAVVAQFN ADQLLTDRPH VSALVRDSLI KRAREFNIIL DDVAITHLSY GADFSQAVEK KQVAQQEAER
201: SKFLVAKAEQ ERRAAIVRAE GESESARLIS EATAIAGTGL IELRRIEAAK EIAAELACSP NVAYIPSGDN GKMLLGLNAA GFGGR
001: MGSQQVAISF LTNLAKAAFG LGVAATALNS SLYTVDGGER AVLFDRFRGV LDQTVGEGTH FLIPYLQTPH IYDIRTKPHT FSSKSGTKDL QMVNLTLRVL
101: FRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVANFN ADQLLTERPQ VSALVRDALI KRAREFNIEL DDIAITHLSY GAEFSRAVEA KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EVAATLARSP NVAYLPGGQS MLFNLNPGR
101: FRPEVSRLPY IFQTLGLEYD EKVLPSIGNE VLKAVVANFN ADQLLTERPQ VSALVRDALI KRAREFNIEL DDIAITHLSY GAEFSRAVEA KQVAQQEAER
201: SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL IELRRIEASR EVAATLARSP NVAYLPGGQS MLFNLNPGR
Arabidopsis Description
PHB4Prohibitin-4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LK25]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.