Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030546.1-P | Field mustard | endoplasmic reticulum | 96.85 | 96.18 |
| CDY15478 | Canola | endoplasmic reticulum | 96.85 | 96.18 |
| CDY32517 | Canola | golgi | 96.5 | 95.83 |
| Bra032539.1-P | Field mustard | golgi | 96.15 | 95.49 |
| CDY10095 | Canola | golgi | 95.8 | 95.14 |
| CDY18191 | Canola | endoplasmic reticulum | 95.45 | 94.79 |
| Bra015273.1-P | Field mustard | endoplasmic reticulum | 94.41 | 93.75 |
| CDX89860 | Canola | endoplasmic reticulum | 91.96 | 91.32 |
| CDX86666 | Canola | mitochondrion | 96.15 | 89.87 |
| AT4G28510.1 | Thale cress | cytosol, mitochondrion, plastid | 85.31 | 84.72 |
| KRH39037 | Soybean | mitochondrion | 82.52 | 81.66 |
| Solyc10g008140.2.1 | Tomato | plastid | 81.47 | 80.62 |
| AT5G44140.1 | Thale cress | golgi | 78.32 | 80.58 |
| PGSC0003DMT400056251 | Potato | cytosol, golgi, mitochondrion | 80.77 | 79.93 |
| KRH24002 | Soybean | mitochondrion | 80.77 | 79.93 |
| AT2G20530.2 | Thale cress | cytosol, mitochondrion, plastid | 79.72 | 79.72 |
| KRH29315 | Soybean | endoplasmic reticulum, mitochondrion | 79.72 | 78.89 |
| KRH22328 | Soybean | cytosol, mitochondrion | 72.03 | 78.33 |
| PGSC0003DMT400035734 | Potato | cytosol, mitochondrion, plastid | 77.97 | 76.37 |
| Solyc12g005500.1.1 | Tomato | plastid | 73.08 | 73.85 |
| KRH26997 | Soybean | mitochondrion, nucleus | 81.47 | 69.35 |
| Os03t0813200-00 | Rice | cytosol, mitochondrion, plasma membrane | 23.78 | 57.63 |
| AT3G27280.2 | Thale cress | cytosol | 42.31 | 43.37 |
| AT5G40770.1 | Thale cress | extracellular, plastid | 41.96 | 43.32 |
| AT5G14300.1 | Thale cress | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 35.31 | 40.56 |
| GSMUA_Achr6P12790_001 | Banana | golgi | 25.52 | 30.42 |
Protein Annotations
| Gene3D:3.30.479.30 | MapMan:35.1 | EntrezGene:839228 | UniProt:A0A178WBG3 | ProteinID:AAD10682.1 | ProteinID:AEE27624.1 |
| ProteinID:AEE27625.1 | ProteinID:AEE27626.1 | EMBL:AF370317 | ArrayExpress:AT1G03860 | EnsemblPlantsGene:AT1G03860 | RefSeq:AT1G03860 |
| TAIR:AT1G03860 | RefSeq:AT1G03860-TAIR-G | EnsemblPlants:AT1G03860.3 | TAIR:AT1G03860.3 | Symbol:ATPHB2 | EMBL:AY063102 |
| Unigene:At.24021 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005747 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030312 |
| RefSeq:NP_171882.1 | RefSeq:NP_973755.1 | RefSeq:NP_973756.1 | ProteinID:OAP15536.1 | PFAM:PF01145 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000017 | PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000282 |
| PO:PO:0000293 | PO:PO:0000351 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0002000 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0006085 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00679 | PANTHER:PTHR23222 | PANTHER:PTHR23222:SF4 | InterPro:Prohibitin |
| UniProt:Q9ZNT7 | SMART:SM00244 | SUPFAM:SSF117892 | EMBL:U66592 | EMBL:U89791 | UniParc:UPI00000AB02A |
Description
PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
Coordinates
chr1:-:979308..981795
Molecular Weight (calculated)
31812.5 Da
IEP (calculated)
9.869
GRAVY (calculated)
-0.155
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.