Factsheet for Bra032539.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32517	Canola	golgi	99.65	99.65
Bra030546.1-P	Field mustard	endoplasmic reticulum	96.18	96.18
AT1G03860.3	Thale cress	endoplasmic reticulum	95.49	96.15
Bra015273.1-P	Field mustard	endoplasmic reticulum	94.1	94.1
Bra010364.1-P	Field mustard	cytosol	70.83	84.3
Bra011035.1-P	Field mustard	cytosol, mitochondrion, plastid	84.72	84.14
KRH39037	Soybean	mitochondrion	81.6	81.31
Solyc10g008140.2.1	Tomato	plastid	80.21	79.93
KRH24002	Soybean	mitochondrion	80.21	79.93
PGSC0003DMT400056251	Potato	cytosol, golgi, mitochondrion	79.86	79.58
KRH29315	Soybean	endoplasmic reticulum, mitochondrion	79.17	78.89
KRH22328	Soybean	cytosol, mitochondrion	71.53	78.33
PGSC0003DMT400035734	Potato	cytosol, mitochondrion, plastid	76.74	75.68
Solyc12g005500.1.1	Tomato	plastid	71.88	73.14
KRH26997	Soybean	mitochondrion, nucleus	81.25	69.64
Os03t0813200-00	Rice	cytosol, mitochondrion, plasma membrane	23.26	56.78
Bra025263.1-P	Field mustard	plastid	42.71	44.24
Bra039086.1-P	Field mustard	plastid	41.67	43.17
Bra025548.1-P	Field mustard	cytosol	40.62	42.24
Bra028475.1-P	Field mustard	extracellular	40.28	41.88
GSMUA_Achr6P12790_001	Banana	golgi	25.0	30.0

Protein Annotations

EnsemblPlants:Bra032539.1	EnsemblPlants:Bra032539.1-P	EnsemblPlantsGene:Bra032539	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Prohibitin	ncoils:Coil	PANTHER:PTHR23222	PANTHER:PTHR23222:SF4
PFAM:PF01145	PRINTS:PR00679	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI000254368C	UniProt:M4EUQ7
MapMan:35.1	:	:	:	:	:

Description

AT1G03860 (E=6e-152) ATPHB2 | ATPHB2 (PROHIBITIN 2)

Coordinates

chrA09:+:36522150..36523736

Molecular Weight (calculated)

32049.8 Da

IEP (calculated)

9.869

GRAVY (calculated)

-0.169

Length

288 amino acids

Sequence
(BLAST)

001: MSFKKVPNVP GSPALSALLK VSVIGGLGVY AISNSLYNVE GGHRAVMFNR LTGIKEKVYP EGTHFMLPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGE RLPHIYRTLG ENYSERVLPS IIHETLKAIV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPSPNK

Best Arabidopsis Sequence Match ( AT1G03860.1 )
(BLAST)

001: MSFNKVPNIP GAPALSALLK VSVIGGLGVY ALTNSLYNVD GGHRAVMFNR LTGIKEKVYP EGTHFMVPWF ERPIIYDVRA RPYLVESTTG SHDLQMVKIG
101: LRVLTRPMGD RLPQIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDRRSAV IRAQGEAKSA QLIGQAIANN QAFITLRKIE AAREIAQTIA QSANKVYLSS NDLLLNLQEM NLEPKK

Arabidopsis Description

PHB2PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.