CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015273.1-P	Field mustard	endoplasmic reticulum	94.79	94.79
CDY18191	Canola	endoplasmic reticulum	94.79	94.79
CDY15478	Canola	endoplasmic reticulum	92.36	92.36
AT1G03860.3	Thale cress	endoplasmic reticulum	91.32	91.96
CDY32517	Canola	golgi	91.32	91.32
CDY10095	Canola	golgi	91.32	91.32
CDX86666	Canola	mitochondrion	92.36	86.93
CDY14238	Canola	cytosol	71.53	85.12
CDY35195	Canola	cytosol, mitochondrion, plastid	85.07	84.48
CDY38382	Canola	cytosol, mitochondrion, plastid	85.07	84.48
KRH24002	Soybean	mitochondrion	81.25	80.97
PGSC0003DMT400056251	Potato	cytosol, golgi, mitochondrion	80.9	80.62
KRH29315	Soybean	endoplasmic reticulum, mitochondrion	80.21	79.93
Solyc10g008140.2.1	Tomato	plastid	79.51	79.24
KRH39037	Soybean	mitochondrion	79.17	78.89
CDX97444	Canola	cytosol, mitochondrion, plastid	70.49	78.08
KRH22328	Soybean	cytosol, mitochondrion	70.83	77.57
PGSC0003DMT400035734	Potato	cytosol, mitochondrion, plastid	77.43	76.37
Solyc12g005500.1.1	Tomato	plastid	71.88	73.14
KRH26997	Soybean	mitochondrion, nucleus	81.6	69.94
Os03t0813200-00	Rice	cytosol, mitochondrion, plasma membrane	22.57	55.08
CDY13700	Canola	plastid	41.67	43.17
CDX83674	Canola	plastid	41.32	42.81
CDY20055	Canola	plastid	40.97	42.45
CDY00161	Canola	plastid	40.97	42.45
CDY42555	Canola	cytosol	39.93	41.52
CDX67477	Canola	extracellular	39.93	41.52
CDY36378	Canola	cytosol	39.93	41.52
CDY11712	Canola	cytosol	39.93	41.52
GSMUA_Achr6P12790_001	Banana	golgi	24.31	29.17

Protein Annotations

EnsemblPlants:CDX89860	EnsemblPlantsGene:GSBRNA2T00150323001	Gene3D:3.30.479.30	GO:A0A078DKY6	GO:GO:0005575	GO:GO:0016020
InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	InterPro:Prohibitin	PANTHER:PTHR23222	PANTHER:PTHR23222:SF4	PFAM:PF01145
PRINTS:PR00679	ProteinID:CDX89860	ProteinID:CDX89860.1	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI0001BA421D
MapMan:35.1	:	:	:	:	:

Description

BnaA10g02220D

Coordinates

chrLK031861:+:436032..437871

Molecular Weight (calculated)

31925.6 Da

IEP (calculated)

9.845

GRAVY (calculated)

-0.155

Length

288 amino acids

Sequence
(BLAST)

001: MSFNKVPNIP GSPALSALLK VSVIGGLGVY AITNSLYNVE GGHRAVMFNR LTGIKEKVYP EGTHFMLPWF ERPIIYDVRA RPYLVESSTG SHDLQTIKIG
101: LRVLTRPMGD RLPHIYRTLG ENYSERVLPS IIHETLKAVV AQYNASQLIT QREAVSREIR KILTERASNF DIALDDVSIT TLTFGKEFTA AIEAKQVAAQ
201: EAERAKFIVE KAEQDKRSAV IRAEGEAKSA QLIGQAIANN EAFITLRKIE AAREIAQTIA KSANKVYLSS NDLLLNLQAM NLEPSSKK

Best Arabidopsis Sequence Match ( AT5G44140.1 )
(BLAST)

001: MNVKKVPNVP GSPALSALLK LGVIGGLGLY CIGSSMYNVD GGHRAIVFNR FTGIKDRVYP EGTHFKIPLF ERAIIYDVRS RPYVENSQTG SNDLQTVTIG
101: LRVLTRPMGD RLPEIYRTLG QNYGERVLPS IINETLKAVV AQYNASHLIT QREAVSREIR KIVTERAAKF NIALDDVSIT NLKFGKEFTE AIEKKQVAAQ
201: EAERAKFIVE KAEQDKKSAI IRAQGEAKSA QLIGQAIANN EAFITLRKIE AAREIAQTIA KSANKVYLNS SDLLISKQ

Arabidopsis Description

PHB7Prohibitin-7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH5]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.