CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G329000.1	Wheat	peroxisome	69.04	91.94
Os05t0509200-01	Rice	mitochondrion	87.19	89.42
TraesCS1A01G326900.1	Wheat	mitochondrion	85.41	86.02
TraesCS1B01G340300.2	Wheat	mitochondrion	84.34	83.75
Zm00001d038658_P001	Maize	mitochondrion	95.37	82.72
VIT_07s0141g00240.t01	Wine grape	mitochondrion	72.6	80.31
HORVU1Hr1G077910.2	Barley	plastid	86.12	79.08
CDY18012	Canola	mitochondrion	70.11	78.49
GSMUA_Achr4P22540_001	Banana	mitochondrion	73.31	78.33
CDX90931	Canola	mitochondrion	70.46	77.65
GSMUA_Achr7P07640_001	Banana	mitochondrion	71.89	77.39
Bra000873.1-P	Field mustard	mitochondrion	70.11	77.25
KRH09710	Soybean	mitochondrion	68.68	76.89
AT4G02580.1	Thale cress	mitochondrion	69.39	76.47
PGSC0003DMT400049678	Potato	extracellular	69.04	76.08
Solyc09g065830.2.1	Tomato	plastid	68.68	75.69
CDX91292	Canola	mitochondrion, plastid	54.8	61.35
KRH23599	Soybean	plastid	62.28	58.53

Protein Annotations

Gene3D:1.10.10.1590	MapMan:2.4.1.1.2	Gene3D:3.40.30.10	UniProt:A0A1B6P999	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0051536
GO:GO:0051537	GO:GO:0055114	EnsemblPlants:KXG22309	ProteinID:KXG22309	ProteinID:KXG22309.1	InterPro:NuoE-like
PFAM:PF01257	PIRSF:PIRSF000216	ScanProsite:PS01099	PANTHER:PTHR10371	PANTHER:PTHR10371:SF9	EnsemblPlantsGene:SORBI_3009G191400
SUPFAM:SSF52833	TIGRFAMs:TIGR01958	InterPro:Thioredoxin-like_sf	UniParc:UPI0001FCCAF6	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:54346740..54352680

Molecular Weight (calculated)

30556.6 Da

IEP (calculated)

7.729

GRAVY (calculated)

-0.283

Length

281 amino acids

Sequence
(BLAST)

001: MLPPAARLAA RRLLGLASAS ASEAAGRRLA SSPIAAAGYS AAASRGSVSS TRPFSTALNY HLDSPENKPD MKWEFSEANM KKVNEILSHY PSNYKQSGII
101: PLLDLAQQQH GGWVPVAAMD AIAKIVEVAP IRVYEVATFY TMFNRTKVGK YHLLVCGTTP CMIRGSREIE DTLLEHLGVK RNEVTSDGLF SVGEMECMGC
201: CVNAPMIAVA DYSKGSEGYT YNYYEDLTPK RVVEIVEMLR RGETPPRGTQ HPERKNCGPA GGNTTLLGEP KPPPCRDLDA C

Best Arabidopsis Sequence Match ( AT4G02580.1 )
(BLAST)

001: MLARLAAKRL LEIRQVFRQP TSQVTRSLST ALNYHLDSPD NKPDLPWEFS EANQSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQNGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC

Arabidopsis Description

NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22769]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.