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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 mitochondrion: 26136264
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G329000.1 Wheat peroxisome 74.91 99.05
TraesCS1B01G340300.2 Wheat mitochondrion 95.7 94.35
HORVU1Hr1G077910.2 Barley plastid 96.42 87.91
Os05t0509200-01 Rice mitochondrion 84.59 86.13
KXG22309 Sorghum mitochondrion 86.02 85.41
VIT_07s0141g00240.t01 Wine grape mitochondrion 73.12 80.31
KRH09710 Soybean mitochondrion 69.18 76.89
GSMUA_Achr4P22540_001 Banana mitochondrion 72.4 76.81
GSMUA_Achr7P07640_001 Banana mitochondrion 71.33 76.25
CDY18012 Canola mitochondrion 68.1 75.7
PGSC0003DMT400049678 Potato extracellular 69.18 75.69
Solyc09g065830.2.1 Tomato plastid 68.82 75.29
Bra000873.1-P Field mustard mitochondrion 68.46 74.9
CDX90931 Canola mitochondrion 68.46 74.9
AT4G02580.1 Thale cress mitochondrion 67.74 74.12
Zm00001d038658_P001 Maize mitochondrion 85.66 73.77
CDX91292 Canola mitochondrion, plastid 53.05 58.96
KRH23599 Soybean plastid 62.72 58.53
Protein Annotations
EnsemblPlants:TraesCS1A01G326900.1EnsemblPlantsGene:TraesCS1A01G326900Gene3D:1.10.10.1590Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:NuoE-likeInterPro:Thioredoxin-like_sf
PANTHER:PTHR10371PANTHER:PTHR10371:SF9PFAM:PF01257PIRSF:PIRSF000216ScanProsite:PS01099SEG:seg
SUPFAM:SSF52833TIGR:cd03064TIGRFAMs:TIGR01958MapMan:2.4.1.1.2::
Description
No Description!
Coordinates
chr1A:+:516769500..516772836
Molecular Weight (calculated)
30364.5 Da
IEP (calculated)
8.193
GRAVY (calculated)
-0.248
Length
279 amino acids
Sequence
(BLAST)
001: MLPPAARLAA RRLLGLASAS ASQSAARRLS PSPLQISSPA AAAATGYFSR TFSSALNYHI DSPDNNPNMP WEFTKANMEK VNEILSHYPS NYKQSGIIPM
101: LDLAQQQHGG WVPVAAMDAI AKIVGVAPIR VYEVATFYSM FNRTKVGKYH LLVCGTTPCM IRGSRDIEDA LLKHLGVKRN EVTSDGLFSV GEMECMGCCV
201: NAPMIAVADY TKGSDGYTYN YYEDLTPKRV VELVEMLRRG ETPPRGTQNP ERKNCGPAGG MTTLLGEPKP PPCRDLDAC
Best Arabidopsis Sequence Match ( AT4G02580.1 )
(BLAST)
001: MLARLAAKRL LEIRQVFRQP TSQVTRSLST ALNYHLDSPD NKPDLPWEFS EANQSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQNGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC
Arabidopsis Description
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22769]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.