Factsheet for TraesCS1D01G329000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G326900.1	Wheat	mitochondrion	99.05	74.91
TraesCS1B01G340300.2	Wheat	mitochondrion	98.1	73.14
Os05t0509200-01	Rice	mitochondrion	91.94	70.8
VIT_07s0141g00240.t01	Wine grape	mitochondrion	84.36	70.08
KXG22309	Sorghum	mitochondrion	91.94	69.04
KRH09710	Soybean	mitochondrion	80.57	67.73
HORVU1Hr1G077910.2	Barley	plastid	98.1	67.65
GSMUA_Achr7P07640_001	Banana	mitochondrion	82.46	66.67
Solyc09g065830.2.1	Tomato	plastid	80.09	66.27
PGSC0003DMT400049678	Potato	extracellular	79.62	65.88
GSMUA_Achr4P22540_001	Banana	mitochondrion	81.99	65.78
CDY18012	Canola	mitochondrion	77.73	65.34
Bra000873.1-P	Field mustard	mitochondrion	78.67	65.1
CDX90931	Canola	mitochondrion	78.2	64.71
AT4G02580.1	Thale cress	mitochondrion	78.2	64.71
Zm00001d038658_P001	Maize	mitochondrion	91.0	59.26
CDX91292	Canola	mitochondrion, plastid	62.56	52.59
KRH23599	Soybean	plastid	72.04	50.84

Protein Annotations

EnsemblPlants:TraesCS1D01G329000.1	EnsemblPlantsGene:TraesCS1D01G329000	Gene3D:1.10.10.1590	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NuoE-like	InterPro:Thioredoxin-like_sf
PANTHER:PTHR10371	PANTHER:PTHR10371:SF9	PFAM:PF01257	PIRSF:PIRSF000216	ScanProsite:PS01099	SUPFAM:SSF52833
TIGR:cd03064	TIGRFAMs:TIGR01958	MapMan:2.4.1.1.2	:	:	:

Description

No Description!

Coordinates

chr1D:+:420536389..420539348

Molecular Weight (calculated)

23347.3 Da

IEP (calculated)

6.113

GRAVY (calculated)

-0.273

Length

211 amino acids

Sequence
(BLAST)

001: MPWEFTKDNM EKVNEILSHY PSNYKQSGII PMLDLAQQQH GGWVPVAAMD AIAKIVGVAP IRVYEVATFY SMFNRTKVGK YHLLVCGTTP CMIRGSCDIE
101: DALLKHLGVK RNEVTSDGLF SVGEMECMGC CVNAPMIAVA DYTKGSDGYT YNYYEDLTPK RVVELVEMLR RGETPPRGTQ NPERKNCGPA GGMTTLLGEP
201: KPPPCRDLDA C

Best Arabidopsis Sequence Match ( AT4G02580.1 )
(BLAST)

001: MLARLAAKRL LEIRQVFRQP TSQVTRSLST ALNYHLDSPD NKPDLPWEFS EANQSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQNGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC

Arabidopsis Description

NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22769]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.