Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000873.1-P Field mustard mitochondrion 96.86 96.86
CDX90931 Canola mitochondrion 96.47 96.47
CDY18012 Canola mitochondrion 94.51 96.02
KRH09710 Soybean mitochondrion 85.88 87.25
VIT_07s0141g00240.t01 Wine grape mitochondrion 85.1 85.43
Solyc09g065830.2.1 Tomato plastid 81.96 81.96
PGSC0003DMT400049678 Potato extracellular 81.57 81.57
GSMUA_Achr4P22540_001 Banana mitochondrion 81.96 79.47
GSMUA_Achr7P07640_001 Banana mitochondrion 80.78 78.93
TraesCS1D01G329000.1 Wheat peroxisome 64.71 78.2
Os05t0509200-01 Rice mitochondrion 75.29 70.07
KXG22309 Sorghum mitochondrion 76.47 69.39
TraesCS1A01G326900.1 Wheat mitochondrion 74.12 67.74
TraesCS1B01G340300.2 Wheat mitochondrion 74.9 67.49
KRH23599 Soybean plastid 78.04 66.56
HORVU1Hr1G077910.2 Barley plastid 74.51 62.09
Zm00001d038658_P001 Maize mitochondrion 75.29 59.26
Protein Annotations
Gene3D:1.10.10.1590MapMan:2.4.1.1.2Gene3D:3.40.30.10EntrezGene:828130ProteinID:AAC78260.1ProteinID:AEE82198.1
ArrayExpress:AT4G02580EnsemblPlantsGene:AT4G02580RefSeq:AT4G02580TAIR:AT4G02580RefSeq:AT4G02580-TAIR-GEnsemblPlants:AT4G02580.1
TAIR:AT4G02580.1EMBL:AY052326EMBL:BT001140ProteinID:CAB80751.1GO:GO:0003674GO:GO:0003824
GO:GO:0003954GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005743GO:GO:0005747GO:GO:0006091GO:GO:0006120GO:GO:0006139
GO:GO:0006950GO:GO:0006979GO:GO:0008137GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0009987GO:GO:0016020GO:GO:0016491GO:GO:0046872GO:GO:0051536GO:GO:0051537
GO:GO:0055114GO:GO:0070469RefSeq:NP_567244.1InterPro:NuoE-likeUniProt:O22769PFAM:PF01257
PIRSF:PIRSF000216PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016
PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281ScanProsite:PS01099PANTHER:PTHR10371
PANTHER:PTHR10371:SF9SUPFAM:SSF52833TIGRFAMs:TIGR01958InterPro:Thioredoxin-like_sfUniParc:UPI00000AC50D:
Description
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22769]
Coordinates
chr4:+:1134429..1137204
Molecular Weight (calculated)
28390.2 Da
IEP (calculated)
8.033
GRAVY (calculated)
-0.360
Length
255 amino acids
Sequence
(BLAST)
001: MLARLAAKRL LEIRQVFRQP TSQVTRSLST ALNYHLDSPD NKPDLPWEFS EANQSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQNGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.