CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09710	Soybean	mitochondrion	74.25	88.45
CDY18012	Canola	mitochondrion	65.89	78.49
Bra000873.1-P	Field mustard	mitochondrion	66.89	78.43
CDX90931	Canola	mitochondrion	66.89	78.43
AT4G02580.1	Thale cress	mitochondrion	66.56	78.04
VIT_07s0141g00240.t01	Wine grape	mitochondrion	66.22	77.95
PGSC0003DMT400049678	Potato	extracellular	62.88	73.73
Solyc09g065830.2.1	Tomato	plastid	62.88	73.73
TraesCS1D01G329000.1	Wheat	peroxisome	50.84	72.04
GSMUA_Achr7P07640_001	Banana	mitochondrion	60.87	69.73
GSMUA_Achr4P22540_001	Banana	mitochondrion	61.2	69.58
Os05t0509200-01	Rice	mitochondrion	59.53	64.96
TraesCS1A01G326900.1	Wheat	mitochondrion	58.53	62.72
KXG22309	Sorghum	mitochondrion	58.53	62.28
CDX91292	Canola	mitochondrion, plastid	52.17	62.15
TraesCS1B01G340300.2	Wheat	mitochondrion	58.53	61.84
HORVU1Hr1G077910.2	Barley	plastid	59.2	57.84
Zm00001d038658_P001	Maize	mitochondrion	59.53	54.94

Protein Annotations

Gene3D:1.10.10.1590	MapMan:2.4.1.1.2	Gene3D:3.40.30.10	UniProt:A0A0R0HBQ2	EMBL:ACUP02008474	EnsemblPlantsGene:GLYMA_13G367000
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
EnsemblPlants:KRH23599	ProteinID:KRH23599	ProteinID:KRH23599.1	InterPro:NuoE-like	PFAM:PF01257	ScanProsite:PS01099
SUPFAM:SSF52833	SignalP:SignalP-noTM	TIGRFAMs:TIGR01958	InterPro:Thioredoxin-like_sf	UniParc:UPI0006ED75F8	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:45257581..45261132

Molecular Weight (calculated)

33577.7 Da

IEP (calculated)

7.072

GRAVY (calculated)

-0.014

Length

299 amino acids

Sequence
(BLAST)

001: MFSYTTPFTS PSLLSLSLSL CDLLRVVASS SKMLARLAAS RFNEIRQIFR QPSRAFSTAL NYHLDTPDNN PKLPWEFTEA NQAKVKEILS HYPSNYKQSA
101: TIPLLDLAQQ QHGGWLPVSA MDAVAKIVEV PPIRVYEVAT FYSMFNRAKV GKYHLLVCGT TPCMIRGSRG IEEALLKHLG VKRNEVTPDG LFSVGEMECM
201: GCCVNAPMIT VADYSNGSEG YTYNYFEDIT PEKVVEIVEK LRKGEKPPVR TLAMIYFIIV HVLETYTFLD YESGFFLFST APKIPAELRV DLKEGTLLC

Best Arabidopsis Sequence Match ( AT4G02580.1 )
(BLAST)

001: MLARLAAKRL LEIRQVFRQP TSQVTRSLST ALNYHLDSPD NKPDLPWEFS EANQSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQNGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC

Arabidopsis Description

NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22769]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.