Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G329000.1 | Wheat | peroxisome | 67.65 | 98.1 |
TraesCS1A01G326900.1 | Wheat | mitochondrion | 87.91 | 96.42 |
TraesCS1B01G340300.2 | Wheat | mitochondrion | 85.62 | 92.58 |
Os05t0509200-01 | Rice | mitochondrion | 78.1 | 87.23 |
KXG22309 | Sorghum | mitochondrion | 79.08 | 86.12 |
VIT_07s0141g00240.t01 | Wine grape | mitochondrion | 66.67 | 80.31 |
Zm00001d038658_P001 | Maize | mitochondrion | 82.03 | 77.47 |
KRH09710 | Soybean | mitochondrion | 63.07 | 76.89 |
GSMUA_Achr4P22540_001 | Banana | mitochondrion | 66.01 | 76.81 |
CDY18012 | Canola | mitochondrion | 62.42 | 76.1 |
GSMUA_Achr7P07640_001 | Banana | mitochondrion | 64.71 | 75.86 |
PGSC0003DMT400049678 | Potato | extracellular | 63.07 | 75.69 |
Solyc09g065830.2.1 | Tomato | plastid | 62.75 | 75.29 |
CDX90931 | Canola | mitochondrion | 62.75 | 75.29 |
Bra000873.1-P | Field mustard | mitochondrion | 62.75 | 75.29 |
AT4G02580.1 | Thale cress | mitochondrion | 62.09 | 74.51 |
CDX91292 | Canola | mitochondrion, plastid | 48.69 | 59.36 |
KRH23599 | Soybean | plastid | 57.84 | 59.2 |
Protein Annotations
EnsemblPlants:HORVU1Hr1G077910.2 | EnsemblPlantsGene:HORVU1Hr1G077910 | Gene3D:1.10.10.1590 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NuoE-like | InterPro:Thioredoxin-like_sf |
PANTHER:PTHR10371 | PANTHER:PTHR10371:SF9 | PFAM:PF01257 | ScanProsite:PS01099 | SEG:seg | SUPFAM:SSF52833 |
TIGRFAMs:TIGR01958 | UniParc:UPI000B4629E9 | UniProt:A0A287GCP8 | MapMan:2.4.1.1.2 | : | : |
Description
No Description!
Coordinates
chrchr1H:-:518897991..519015683
Molecular Weight (calculated)
32890.2 Da
IEP (calculated)
7.061
GRAVY (calculated)
-0.271
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: EASLAVAGSH TNTSDRTPAD TTTAPSPAAM LPPAARLAAR RLLGLASASA SQPAARRLSP SPISSSAAAA ATGYFSRTFS SALNYHIDSP DNNPNMPWEF
101: TKANMEKVNE ILSHYPSNYK QSGIIPMLDL AQQQHGGWVP VAAMDAIAKI VGVAPIRVYE VATFYSMFNR TKVGKYHLLV CGTTPCMIRG SRDIEDALLE
201: HLGVKRNEVT SDGLFSVGEM ECMGCCVNAP MIAVADYSKG SDGYTYNYYE DLTPKRVVEL VEMLRRGETP PRGTQNPERK NCGPAGGMTT LLGEPKPPPC
301: RDLDAC
101: TKANMEKVNE ILSHYPSNYK QSGIIPMLDL AQQQHGGWVP VAAMDAIAKI VGVAPIRVYE VATFYSMFNR TKVGKYHLLV CGTTPCMIRG SRDIEDALLE
201: HLGVKRNEVT SDGLFSVGEM ECMGCCVNAP MIAVADYSKG SDGYTYNYYE DLTPKRVVEL VEMLRRGETP PRGTQNPERK NCGPAGGMTT LLGEPKPPPC
301: RDLDAC
001: MLARLAAKRL LEIRQVFRQP TSQVTRSLST ALNYHLDSPD NKPDLPWEFS EANQSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQNGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC
Arabidopsis Description
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22769]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.