Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • peroxisome 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G329000.1 Wheat peroxisome 67.65 98.1
TraesCS1A01G326900.1 Wheat mitochondrion 87.91 96.42
TraesCS1B01G340300.2 Wheat mitochondrion 85.62 92.58
Os05t0509200-01 Rice mitochondrion 78.1 87.23
KXG22309 Sorghum mitochondrion 79.08 86.12
VIT_07s0141g00240.t01 Wine grape mitochondrion 66.67 80.31
Zm00001d038658_P001 Maize mitochondrion 82.03 77.47
KRH09710 Soybean mitochondrion 63.07 76.89
GSMUA_Achr4P22540_001 Banana mitochondrion 66.01 76.81
CDY18012 Canola mitochondrion 62.42 76.1
GSMUA_Achr7P07640_001 Banana mitochondrion 64.71 75.86
PGSC0003DMT400049678 Potato extracellular 63.07 75.69
Solyc09g065830.2.1 Tomato plastid 62.75 75.29
CDX90931 Canola mitochondrion 62.75 75.29
Bra000873.1-P Field mustard mitochondrion 62.75 75.29
AT4G02580.1 Thale cress mitochondrion 62.09 74.51
CDX91292 Canola mitochondrion, plastid 48.69 59.36
KRH23599 Soybean plastid 57.84 59.2
Protein Annotations
EnsemblPlants:HORVU1Hr1G077910.2EnsemblPlantsGene:HORVU1Hr1G077910Gene3D:1.10.10.1590Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:NuoE-likeInterPro:Thioredoxin-like_sf
PANTHER:PTHR10371PANTHER:PTHR10371:SF9PFAM:PF01257ScanProsite:PS01099SEG:segSUPFAM:SSF52833
TIGRFAMs:TIGR01958UniParc:UPI000B4629E9UniProt:A0A287GCP8MapMan:2.4.1.1.2::
Description
No Description!
Coordinates
chrchr1H:-:518897991..519015683
Molecular Weight (calculated)
32890.2 Da
IEP (calculated)
7.061
GRAVY (calculated)
-0.271
Length
306 amino acids
Sequence
(BLAST)
001: EASLAVAGSH TNTSDRTPAD TTTAPSPAAM LPPAARLAAR RLLGLASASA SQPAARRLSP SPISSSAAAA ATGYFSRTFS SALNYHIDSP DNNPNMPWEF
101: TKANMEKVNE ILSHYPSNYK QSGIIPMLDL AQQQHGGWVP VAAMDAIAKI VGVAPIRVYE VATFYSMFNR TKVGKYHLLV CGTTPCMIRG SRDIEDALLE
201: HLGVKRNEVT SDGLFSVGEM ECMGCCVNAP MIAVADYSKG SDGYTYNYYE DLTPKRVVEL VEMLRRGETP PRGTQNPERK NCGPAGGMTT LLGEPKPPPC
301: RDLDAC
Best Arabidopsis Sequence Match ( AT4G02580.1 )
(BLAST)
001: MLARLAAKRL LEIRQVFRQP TSQVTRSLST ALNYHLDSPD NKPDLPWEFS EANQSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQNGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC
Arabidopsis Description
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22769]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.