CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18012	Canola	mitochondrion	97.25	98.8
Bra000873.1-P	Field mustard	mitochondrion	98.43	98.43
AT4G02580.1	Thale cress	mitochondrion	96.47	96.47
KRH09710	Soybean	mitochondrion	86.27	87.65
VIT_07s0141g00240.t01	Wine grape	mitochondrion	87.06	87.4
PGSC0003DMT400049678	Potato	extracellular	82.35	82.35
Solyc09g065830.2.1	Tomato	plastid	82.35	82.35
GSMUA_Achr4P22540_001	Banana	mitochondrion	83.53	80.99
GSMUA_Achr7P07640_001	Banana	mitochondrion	82.35	80.46
TraesCS1D01G329000.1	Wheat	peroxisome	64.71	78.2
CDX91292	Canola	mitochondrion, plastid	76.86	78.09
Os05t0509200-01	Rice	mitochondrion	76.86	71.53
KXG22309	Sorghum	mitochondrion	77.65	70.46
TraesCS1A01G326900.1	Wheat	mitochondrion	74.9	68.46
TraesCS1B01G340300.2	Wheat	mitochondrion	75.69	68.2
KRH23599	Soybean	plastid	78.43	66.89
HORVU1Hr1G077910.2	Barley	plastid	75.29	62.75
Zm00001d038658_P001	Maize	mitochondrion	76.86	60.49

Protein Annotations

Gene3D:1.10.10.1590	MapMan:2.4.1.1.2	Gene3D:3.40.30.10	GO:A0A078DNV1	EnsemblPlants:CDX90931	ProteinID:CDX90931
ProteinID:CDX90931.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00151671001	InterPro:NuoE-like	PFAM:PF01257	PIRSF:PIRSF000216	ScanProsite:PS01099
PANTHER:PTHR10371	PANTHER:PTHR10371:SF9	SUPFAM:SSF52833	TIGRFAMs:TIGR01958	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE5E6A

Description

BnaA03g26110D

Coordinates

chrLK031864:-:1407386..1409906

Molecular Weight (calculated)

28361.1 Da

IEP (calculated)

8.261

GRAVY (calculated)

-0.373

Length

255 amino acids

Sequence
(BLAST)

001: MLARLAAKRL LEIRQAFRQA PSQASRSFST ALNYHLDSPD NKPDLPWEFS EANKSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQHGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS REIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC

Best Arabidopsis Sequence Match ( AT4G02580.1 )
(BLAST)

001: MLARLAAKRL LEIRQVFRQP TSQVTRSLST ALNYHLDSPD NKPDLPWEFS EANQSKVKEI LSYYPSNYKQ SAVIPLLDLA QQQNGGWLPV SAMNAVAKVI
101: EVAPIRVYEV ATFYSMFNRA KVGKYHLLVC GTTPCMIRGS RDIESALLDH LGVKRGEVTK DGLFSVGEME CMGCCVNAPM ITVADYSNGS EGYTYNYFED
201: VTPEKVVEIV EKLRKGEKPP HGTQNPKRIK CGPEGGNKTL LGEPKPPQFR DLDAC

Arabidopsis Description

NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O22769]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.