CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G196100.1	Wheat	mitochondrion	93.63	93.04
TraesCS2B01G215200.1	Wheat	mitochondrion	93.63	93.04
TraesCS2A01G191500.1	Wheat	mitochondrion	93.63	93.04
Os07t0585800-01	Rice	mitochondrion	93.63	92.45
VIT_07s0151g00140.t01	Wine grape	cytosol	33.12	78.79
Solyc02g092270.2.1	Tomato	plastid	36.94	76.32
HORVU2Hr1G035860.1	Barley	mitochondrion	92.36	75.13
VIT_07s0151g00490.t01	Wine grape	mitochondrion	72.61	74.03
KRH04413	Soybean	endoplasmic reticulum	68.15	73.29
GSMUA_AchrUn_...	Banana	mitochondrion	73.25	72.78
KRH58129	Soybean	mitochondrion	67.52	72.6
GSMUA_Achr8P31080_001	Banana	mitochondrion	70.7	68.1
CDY18667	Canola	mitochondrion	63.06	64.29
AT5G67590.1	Thale cress	mitochondrion	61.15	62.34
Bra024437.1-P	Field mustard	mitochondrion	60.51	62.09
CDY08730	Canola	mitochondrion	60.51	62.09
CDX81305	Canola	mitochondrion	60.51	62.09
CDY36505	Canola	mitochondrion	59.24	62.0
Zm00001d021958_P002	Maize	mitochondrion	82.17	59.45
PGSC0003DMT400055230	Potato	mitochondrion	20.38	57.14
CDX87559	Canola	mitochondrion	52.87	56.85
Bra037836.1-P	Field mustard	mitochondrion	33.12	55.32
VIT_00s1311g00010.t01	Wine grape	mitochondrion	38.85	51.69

Protein Annotations

MapMan:2.4.1.4.3	Gene3D:3.30.160.190	EntrezGene:8078970	UniProt:C5XD18	EnsemblPlants:EER99617	ProteinID:EER99617
ProteinID:EER99617.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0006091	GO:GO:0006950
GO:GO:0006970	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009631	GO:GO:0009987
GO:GO:0016020	GO:GO:0016651	GO:GO:0022900	GO:GO:0050897	InterPro:IPR038532	InterPro:NADH_UbQ_FeS_4_mit
InterPro:NDUFS4-like_sf	PFAM:PF04800	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	EnsemblPlantsGene:SORBI_3002G356400	unigene:Sbi.3349
UniParc:UPI0001A83C26	RefSeq:XP_002463096.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:71914118..71920803

Molecular Weight (calculated)

17254.7 Da

IEP (calculated)

10.622

GRAVY (calculated)

-0.489

Length

157 amino acids

Sequence
(BLAST)

001: MAAPLRRSLP SLGRALLTPA PARMLSAEAS DALVEIKPGE IGMVSGIPEE HLRRKVLIYS PARTASQQGS GKVGRWKINF LSTQKWENPL MGWTSTGDPY
101: ANVGEAGLTF DSAESAKAFA EKHGWNYVVR KRHTPLLKPK AYAENFKWRG PPKAEQA

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.