Factsheet for VIT_07s0151g00490.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0151g00140.t01	Wine grape	cytosol	42.86	100.0
Solyc02g092270.2.1	Tomato	plastid	42.86	86.84
KRH04413	Soybean	endoplasmic reticulum	74.68	78.77
KRH58129	Soybean	mitochondrion	74.68	78.77
VIT_00s1311g00010.t01	Wine grape	mitochondrion	56.49	73.73
Zm00001d006714_P001	Maize	mitochondrion	74.68	73.25
TraesCS2D01G196100.1	Wheat	mitochondrion	74.68	72.78
TraesCS2B01G215200.1	Wheat	mitochondrion	74.68	72.78
TraesCS2A01G191500.1	Wheat	mitochondrion	74.68	72.78
EER99617	Sorghum	mitochondrion	74.03	72.61
GSMUA_AchrUn_...	Banana	mitochondrion	73.38	71.52
Os07t0585800-01	Rice	mitochondrion	73.38	71.07
CDY18667	Canola	mitochondrion	68.83	68.83
GSMUA_Achr8P31080_001	Banana	mitochondrion	72.08	68.1
CDY36505	Canola	mitochondrion	65.58	67.33
Bra024437.1-P	Field mustard	mitochondrion	66.88	67.32
CDY08730	Canola	mitochondrion	66.88	67.32
AT5G67590.1	Thale cress	mitochondrion	66.88	66.88
CDX81305	Canola	mitochondrion	66.23	66.67
PGSC0003DMT400055230	Potato	mitochondrion	22.08	60.71
CDX87559	Canola	mitochondrion	57.14	60.27
HORVU2Hr1G035860.1	Barley	mitochondrion	73.38	58.55
Bra037836.1-P	Field mustard	mitochondrion	33.12	54.26
Zm00001d021958_P002	Maize	mitochondrion	61.04	43.32

Protein Annotations

EntrezGene:100250742	wikigene:100250742	EntrezGene:100852788	wikigene:100852788	MapMan:2.4.1.4.3	Gene3D:3.30.160.190
UniProt:A5C501	EMBL:AM482581	ProteinID:CAN83933	ProteinID:CAN83933.1	ProteinID:CBI41092	ProteinID:CBI41092.3
ProteinID:CCB61101	ProteinID:CCB61101.1	EMBL:FN596550	EMBL:FN596834	GO:GO:0003674	GO:GO:0003824
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016651	GO:GO:0022900
InterPro:IPR038532	EntrezGene:LOC100250742	wikigene:LOC100250742	EntrezGene:LOC100852788	wikigene:LOC100852788	InterPro:NADH_UbQ_FeS_4_mit
InterPro:NDUFS4-like_sf	PFAM:PF04800	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	TIGR:TC54671	UniParc:UPI0001524B5B
ArrayExpress:VIT_07s0151g00490	EnsemblPlantsGene:VIT_07s0151g00490	EnsemblPlants:VIT_07s0151g00490.t01	unigene:Vvi.5096	RefSeq:XP_002265704	RefSeq:XP_002265704.1
RefSeq:XP_003634841	RefSeq:XP_003634841.1	RefSeq:XP_003634841.2	:	:	:

Description

No Description!

Coordinates

chr7_random:+:940234..947209

Molecular Weight (calculated)

17128.4 Da

IEP (calculated)

10.395

GRAVY (calculated)

-0.631

Length

154 amino acids

Sequence
(BLAST)

001: MAKSLQRLWS HGGSLRSAFA PMSRPFSADA LVEIKPGEIG MVSGIPEEHL RRRVVIFSPA RTATQQGSGK VGRWKINFMS TQKWENPLMG WTSTGDPYAN
101: VGDAGLGFDS EEAAKAFAEK HGWEYTVKKR QTPLLKTKAY ADNFKWKGPP KTED

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.