Factsheet for Solyc02g092270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0151g00140.t01	Wine grape	cytosol	73.68	84.85
KRH58129	Soybean	mitochondrion	86.84	45.21
KRH04413	Soybean	endoplasmic reticulum	85.53	44.52
VIT_07s0151g00490.t01	Wine grape	mitochondrion	86.84	42.86
CDY18667	Canola	mitochondrion	78.95	38.96
GSMUA_AchrUn_...	Banana	mitochondrion	80.26	38.61
AT5G67590.1	Thale cress	mitochondrion	77.63	38.31
GSMUA_Achr8P31080_001	Banana	mitochondrion	81.58	38.04
TraesCS2D01G196100.1	Wheat	mitochondrion	78.95	37.97
TraesCS2B01G215200.1	Wheat	mitochondrion	78.95	37.97
TraesCS2A01G191500.1	Wheat	mitochondrion	78.95	37.97
CDX81305	Canola	mitochondrion	76.32	37.91
Zm00001d006714_P001	Maize	mitochondrion	77.63	37.58
Bra024437.1-P	Field mustard	mitochondrion	75.0	37.25
CDY08730	Canola	mitochondrion	75.0	37.25
EER99617	Sorghum	mitochondrion	76.32	36.94
CDY36505	Canola	mitochondrion	72.37	36.67
Os07t0585800-01	Rice	mitochondrion	76.32	36.48
HORVU2Hr1G035860.1	Barley	mitochondrion	77.63	30.57
CDX87559	Canola	mitochondrion	55.26	28.77
Zm00001d021958_P002	Maize	mitochondrion	50.0	17.51
VIT_00s1311g00010.t01	Wine grape	mitochondrion	14.47	9.32
Bra037836.1-P	Field mustard	mitochondrion	5.26	4.26
PGSC0003DMT400055230	Potato	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc02g092270.2.1	EnsemblPlantsGene:Solyc02g092270.2	Gene3D:3.30.160.190	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016651	GO:GO:0022900	InterPro:IPR038532
InterPro:NADH_UbQ_FeS_4_mit	InterPro:NDUFS4-like_sf	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	PFAM:PF04800	SEG:seg
UniParc:UPI0002767F44	UniProt:K4BD23	MapMan:2.4.1.4.3	:	:	:

Description

No Description!

Coordinates

chr2:-:53404478..53409174

Molecular Weight (calculated)

8591.0 Da

IEP (calculated)

8.932

GRAVY (calculated)

-0.897

Length

76 amino acids

Sequence
(BLAST)

1: MSTQKWENPL MGWTSTGDPY ANVGDSALSF ESEEAAKAFA EKHGWEYTVK KRHTPLLKIK SYADNFKWKG PPKAAE

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.