CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024437.1-P	Field mustard	mitochondrion	94.0	92.16
CDY08730	Canola	mitochondrion	94.0	92.16
CDX81305	Canola	mitochondrion	88.0	86.27
CDY18667	Canola	mitochondrion	88.0	85.71
AT5G67590.1	Thale cress	mitochondrion	84.0	81.82
CDX87559	Canola	mitochondrion	74.67	76.71
Solyc02g092270.2.1	Tomato	plastid	36.67	72.37
VIT_07s0151g00140.t01	Wine grape	cytosol	31.33	71.21
KRH58129	Soybean	mitochondrion	68.0	69.86
KRH04413	Soybean	endoplasmic reticulum	67.33	69.18
VIT_07s0151g00490.t01	Wine grape	mitochondrion	67.33	65.58
GSMUA_AchrUn_...	Banana	mitochondrion	68.0	64.56
GSMUA_Achr8P31080_001	Banana	mitochondrion	68.67	63.19
Os07t0585800-01	Rice	mitochondrion	65.33	61.64
TraesCS2A01G191500.1	Wheat	mitochondrion	63.33	60.13
TraesCS2B01G215200.1	Wheat	mitochondrion	63.33	60.13
TraesCS2D01G196100.1	Wheat	mitochondrion	63.33	60.13
EER99617	Sorghum	mitochondrion	62.0	59.24
Zm00001d006714_P001	Maize	mitochondrion	62.0	59.24
HORVU2Hr1G035860.1	Barley	mitochondrion	64.67	50.26
VIT_00s1311g00010.t01	Wine grape	mitochondrion	35.33	44.92
PGSC0003DMT400055230	Potato	mitochondrion	14.67	39.29
Zm00001d021958_P002	Maize	mitochondrion	52.67	36.41

Protein Annotations

EnsemblPlants:CDY36505	EnsemblPlantsGene:GSBRNA2T00062175001	Gene3D:3.30.160.190	GO:A0A078HDT1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016651	GO:GO:0022900
InterPro:IPR038532	InterPro:NADH_UbQ_FeS_4_mit	InterPro:NDUFS4-like_sf	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	PFAM:PF04800
ProteinID:CDY36505	ProteinID:CDY36505.1	UniParc:UPI0004EB0512	UniProt:A0A078HDT1	MapMan:2.4.1.4.3	:

Description

BnaC03g48640DBnaC03g48640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDT1]

Coordinates

chrLK032377:+:297002..298385

Molecular Weight (calculated)

16446.5 Da

IEP (calculated)

10.365

GRAVY (calculated)

-0.483

Length

150 amino acids

Sequence
(BLAST)

001: MALRATQSTA RIAARVGRTF STDAVVESDC KRGEIGKVSG IPEEHLARKV IIYSPARTAT QQGSGKLGKW KINFVSTLKW ENPLMGWTST GDPYANVGDS
101: ALGFDSELAA KSFADRHGWD FVVKAPKTPL LKAKSYSDNF KWKGKPQLEN

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.