Factsheet for Os07t0585800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99617	Sorghum	mitochondrion	92.45	93.63
Zm00001d006714_P001	Maize	mitochondrion	90.57	91.72
TraesCS2D01G196100.1	Wheat	mitochondrion	90.57	91.14
TraesCS2B01G215200.1	Wheat	mitochondrion	90.57	91.14
TraesCS2A01G191500.1	Wheat	mitochondrion	90.57	91.14
Solyc02g092270.2.1	Tomato	plastid	36.48	76.32
VIT_07s0151g00140.t01	Wine grape	cytosol	31.45	75.76
HORVU2Hr1G035860.1	Barley	mitochondrion	89.31	73.58
GSMUA_AchrUn_...	Banana	mitochondrion	72.96	73.42
VIT_07s0151g00490.t01	Wine grape	mitochondrion	71.07	73.38
KRH04413	Soybean	endoplasmic reticulum	66.67	72.6
KRH58129	Soybean	mitochondrion	66.67	72.6
GSMUA_Achr8P31080_001	Banana	mitochondrion	71.07	69.33
CDY36505	Canola	mitochondrion	61.64	65.33
Bra024437.1-P	Field mustard	mitochondrion	62.26	64.71
CDY08730	Canola	mitochondrion	62.26	64.71
CDY18667	Canola	mitochondrion	62.26	64.29
AT5G67590.1	Thale cress	mitochondrion	61.64	63.64
CDX81305	Canola	mitochondrion	60.38	62.75
PGSC0003DMT400055230	Potato	mitochondrion	20.13	57.14
CDX87559	Canola	mitochondrion	52.2	56.85
Zm00001d021958_P002	Maize	mitochondrion	76.1	55.76
Bra037836.1-P	Field mustard	mitochondrion	32.08	54.26
VIT_00s1311g00010.t01	Wine grape	mitochondrion	39.62	53.39

Protein Annotations

MapMan:2.4.1.4.3	Gene3D:3.30.160.190	EntrezGene:4343746	ProteinID:BAD30267.1	ProteinID:BAF22040.1	ProteinID:BAT02385.1
ProteinID:EEE67488.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0006091	GO:GO:0006950
GO:GO:0006970	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009631	GO:GO:0009987
GO:GO:0016020	GO:GO:0016651	GO:GO:0022900	GO:GO:0050897	InterPro:IPR038532	InterPro:NADH_UbQ_FeS_4_mit
InterPro:NDUFS4-like_sf	EnsemblPlantsGene:Os07g0585800	EnsemblPlants:Os07t0585800-01	PFAM:PF04800	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8
UniProt:Q69WE3	UniParc:UPI00003FE795	RefSeq:XP_015647935.1	:	:	:

Description

Similar to NADH-ubiquinone oxidoreductase 18 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-18KD) (CI-18KD) (Fragment). (Os07t0585800-01)

Coordinates

chr7:-:23798071..23802654

Molecular Weight (calculated)

17345.7 Da

IEP (calculated)

10.622

GRAVY (calculated)

-0.470

Length

159 amino acids

Sequence
(BLAST)

001: MAAPLRRSLP SLGRTLLSPS PAPARMLSAA ASDALVEIKP GEIGMVSGIP EEHLRRKVVI YSPARTASQQ GSGKVGRWKI NFVSTQKWEN PLMGWTSTGD
101: PYANVGEAGL TFDSADSAKA FAEKHGWDYV VRKRHTPLLK AKSYAENFKW RGPPKAEQA

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.