Factsheet for GSMUA_AchrUn_randomP23940_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P31080_001	Banana	mitochondrion	87.97	85.28
VIT_07s0151g00140.t01	Wine grape	cytosol	34.18	81.82
Solyc02g092270.2.1	Tomato	plastid	38.61	80.26
TraesCS2D01G196100.1	Wheat	mitochondrion	75.32	75.32
TraesCS2B01G215200.1	Wheat	mitochondrion	75.32	75.32
TraesCS2A01G191500.1	Wheat	mitochondrion	75.32	75.32
VIT_07s0151g00490.t01	Wine grape	mitochondrion	71.52	73.38
KRH58129	Soybean	mitochondrion	67.72	73.29
Zm00001d006714_P001	Maize	mitochondrion	72.78	73.25
EER99617	Sorghum	mitochondrion	72.78	73.25
Os07t0585800-01	Rice	mitochondrion	73.42	72.96
KRH04413	Soybean	endoplasmic reticulum	65.82	71.23
AT5G67590.1	Thale cress	mitochondrion	67.09	68.83
CDY36505	Canola	mitochondrion	64.56	68.0
Bra024437.1-P	Field mustard	mitochondrion	65.82	67.97
CDY08730	Canola	mitochondrion	65.82	67.97
CDY18667	Canola	mitochondrion	65.19	66.88
CDX81305	Canola	mitochondrion	64.56	66.67
HORVU2Hr1G035860.1	Barley	mitochondrion	74.05	60.62
CDX87559	Canola	mitochondrion	51.9	56.16
PGSC0003DMT400055230	Potato	mitochondrion	18.99	53.57
Bra037836.1-P	Field mustard	mitochondrion	31.01	52.13
VIT_00s1311g00010.t01	Wine grape	mitochondrion	38.61	51.69
Zm00001d021958_P002	Maize	mitochondrion	60.13	43.78

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP23940_001	EnsemblPlants:GSMUA_AchrUn_randomT23940_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG23940_001	Gene3D:3.30.160.190	GO:GO:0003674	GO:GO:0003824
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016651	GO:GO:0022900
InterPro:IPR038532	InterPro:NADH_UbQ_FeS_4_mit	InterPro:NDUFS4-like_sf	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	PFAM:PF04800
UniParc:UPI0002953D29	UniProt:M0UBV2	MapMan:2.4.1.4.3	:	:	:

Description

Putative NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23940_001]

Coordinates

chrchrUn_random:+:118060668..118069950

Molecular Weight (calculated)

17655.0 Da

IEP (calculated)

10.645

GRAVY (calculated)

-0.551

Length

158 amino acids

Sequence
(BLAST)

001: MAAPLRRSFS FLARLTLTRS VSLSQTRSLA SDALVELRPG EIGIVSGVPR EHLRRRVIIY SPARTATQQG SGKVGKWKIN FVSTQKWENP LMGWTSTGDP
101: YANVGDAGLA FDSEEGAKAF AEKYGWDYVV RKPHTPLLKP KSYSDNFKWK GPPKTEER

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.