Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 3
- cytosol 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g092270.2.1 | Tomato | plastid | 84.85 | 73.68 |
| VIT_07s0151g00490.t01 | Wine grape | mitochondrion | 100.0 | 42.86 |
| KRH58129 | Soybean | mitochondrion | 80.3 | 36.3 |
| KRH04413 | Soybean | endoplasmic reticulum | 78.79 | 35.62 |
| TraesCS2D01G196100.1 | Wheat | mitochondrion | 81.82 | 34.18 |
| TraesCS2B01G215200.1 | Wheat | mitochondrion | 81.82 | 34.18 |
| TraesCS2A01G191500.1 | Wheat | mitochondrion | 81.82 | 34.18 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 81.82 | 34.18 |
| GSMUA_Achr8P31080_001 | Banana | mitochondrion | 83.33 | 33.74 |
| Zm00001d006714_P001 | Maize | mitochondrion | 78.79 | 33.12 |
| EER99617 | Sorghum | mitochondrion | 78.79 | 33.12 |
| AT5G67590.1 | Thale cress | mitochondrion | 75.76 | 32.47 |
| CDY18667 | Canola | mitochondrion | 75.76 | 32.47 |
| Bra024437.1-P | Field mustard | mitochondrion | 74.24 | 32.03 |
| CDY08730 | Canola | mitochondrion | 74.24 | 32.03 |
| CDX81305 | Canola | mitochondrion | 74.24 | 32.03 |
| Os07t0585800-01 | Rice | mitochondrion | 75.76 | 31.45 |
| CDY36505 | Canola | mitochondrion | 71.21 | 31.33 |
| HORVU2Hr1G035860.1 | Barley | mitochondrion | 80.3 | 27.46 |
| CDX87559 | Canola | mitochondrion | 48.48 | 21.92 |
| Zm00001d021958_P002 | Maize | mitochondrion | 48.48 | 14.75 |
| VIT_00s1311g00010.t01 | Wine grape | mitochondrion | 7.58 | 4.24 |
| Bra037836.1-P | Field mustard | mitochondrion | 1.52 | 1.06 |
| PGSC0003DMT400055230 | Potato | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:100852788 | wikigene:100852788 | MapMan:2.4.1.4.3 | Gene3D:3.30.160.190 | ProteinID:CBI41092 | ProteinID:CBI41092.3 |
| UniProt:D7UEC8 | EMBL:FN596834 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016651 | GO:GO:0022900 | InterPro:IPR038532 | EntrezGene:LOC100852788 |
| wikigene:LOC100852788 | InterPro:NADH_UbQ_FeS_4_mit | InterPro:NDUFS4-like_sf | PFAM:PF04800 | PANTHER:PTHR12219 | PANTHER:PTHR12219:SF8 |
| UniParc:UPI0001985DD5 | ArrayExpress:VIT_07s0151g00140 | EnsemblPlantsGene:VIT_07s0151g00140 | EnsemblPlants:VIT_07s0151g00140.t01 | : | : |
Description
No Description!
Coordinates
chr7_random:+:774106..775908
Molecular Weight (calculated)
7338.5 Da
IEP (calculated)
7.523
GRAVY (calculated)
-0.991
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MGWTSTGDPY ANVGDAGLGF DSEEAAKAFA EKHGWEYTVK KRQTPLLKTK AYADNFKWKG PPKTED
001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN
Arabidopsis Description
FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.