CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81305	Canola	mitochondrion	96.1	96.73
CDY08730	Canola	mitochondrion	90.91	91.5
AT5G67590.1	Thale cress	mitochondrion	88.96	88.96
CDY36505	Canola	mitochondrion	85.71	88.0
CDX87559	Canola	mitochondrion	82.47	86.99
Solyc02g092270.2.1	Tomato	plastid	38.96	78.95
VIT_07s0151g00140.t01	Wine grape	cytosol	32.47	75.76
KRH04413	Soybean	endoplasmic reticulum	69.48	73.29
KRH58129	Soybean	mitochondrion	69.48	73.29
VIT_07s0151g00490.t01	Wine grape	mitochondrion	68.83	68.83
GSMUA_AchrUn_...	Banana	mitochondrion	66.88	65.19
EER99617	Sorghum	mitochondrion	64.29	63.06
Zm00001d006714_P001	Maize	mitochondrion	64.29	63.06
GSMUA_Achr8P31080_001	Banana	mitochondrion	66.23	62.58
Os07t0585800-01	Rice	mitochondrion	64.29	62.26
TraesCS2B01G215200.1	Wheat	mitochondrion	63.64	62.03
TraesCS2D01G196100.1	Wheat	mitochondrion	63.64	62.03
TraesCS2A01G191500.1	Wheat	mitochondrion	63.64	62.03
HORVU2Hr1G035860.1	Barley	mitochondrion	63.64	50.78
VIT_00s1311g00010.t01	Wine grape	mitochondrion	37.01	48.31
PGSC0003DMT400055230	Potato	mitochondrion	15.58	42.86
Zm00001d021958_P002	Maize	mitochondrion	53.9	38.25

Protein Annotations

MapMan:2.4.1.4.3	Gene3D:3.30.160.190	GO:A0A078G0Z3	UniProt:A0A078G0Z3	EnsemblPlants:CDY18667	ProteinID:CDY18667
ProteinID:CDY18667.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016651	GO:GO:0022900	EnsemblPlantsGene:GSBRNA2T00005738001	InterPro:IPR038532	InterPro:NADH_UbQ_FeS_4_mit
InterPro:NDUFS4-like_sf	PFAM:PF04800	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	UniParc:UPI0004EEF1C4	SEG:seg

Description

BnaA09g07280DBnaA09g07280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0Z3]

Coordinates

chrLK032087:+:386526..387942

Molecular Weight (calculated)

17075.2 Da

IEP (calculated)

10.406

GRAVY (calculated)

-0.704

Length

154 amino acids

Sequence
(BLAST)

001: MALRATQSTG RIAAAALRRV ARPFSTDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQQGSGK LGKWKINFLS TLKWENPLMG WTSTGDPYAN
101: VGDSALSFDS EDAAKSFAER HGWDYTVKKP KTPLLKPKSY SDNFKWKGNP QPEK

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.