Factsheet for Zm00001d006714_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G196100.1	Wheat	mitochondrion	92.99	92.41
TraesCS2B01G215200.1	Wheat	mitochondrion	92.99	92.41
TraesCS2A01G191500.1	Wheat	mitochondrion	92.99	92.41
Os07t0585800-01	Rice	mitochondrion	91.72	90.57
VIT_07s0151g00140.t01	Wine grape	cytosol	33.12	78.79
Solyc02g092270.2.1	Tomato	plastid	37.58	77.63
VIT_07s0151g00490.t01	Wine grape	mitochondrion	73.25	74.68
HORVU2Hr1G035860.1	Barley	mitochondrion	91.72	74.61
GSMUA_AchrUn_...	Banana	mitochondrion	73.25	72.78
KRH58129	Soybean	mitochondrion	67.52	72.6
KRH04413	Soybean	endoplasmic reticulum	66.88	71.92
GSMUA_Achr8P31080_001	Banana	mitochondrion	70.06	67.48
CDY18667	Canola	mitochondrion	63.06	64.29
AT5G67590.1	Thale cress	mitochondrion	61.15	62.34
Bra024437.1-P	Field mustard	mitochondrion	60.51	62.09
CDY08730	Canola	mitochondrion	60.51	62.09
CDX81305	Canola	mitochondrion	60.51	62.09
CDY36505	Canola	mitochondrion	59.24	62.0
PGSC0003DMT400055230	Potato	mitochondrion	21.02	58.93
Zm00001d021958_P002	Maize	mitochondrion	79.62	57.6
CDX87559	Canola	mitochondrion	52.23	56.16
Bra037836.1-P	Field mustard	mitochondrion	33.12	55.32
VIT_00s1311g00010.t01	Wine grape	mitochondrion	39.49	52.54

Protein Annotations

EntrezGene:100193844	MapMan:2.4.1.4.3	Gene3D:3.30.160.190	UniProt:B4FGH7	EMBL:BT036215	EMBL:EU953993
GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016651	GO:GO:0022900	InterPro:IPR038532	InterPro:NADH_UbQ_FeS_4_mit	InterPro:NDUFS4-like_sf	ProteinID:ONM24780.1
ProteinID:ONM24781.1	PFAM:PF04800	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	UniParc:UPI00017B694A	EnsemblPlantsGene:Zm00001d006714
EnsemblPlants:Zm00001d006714_P001	EnsemblPlants:Zm00001d006714_T001	:	:	:	:

Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 4 mitochondrial

Coordinates

chr2:-:215023176..215029253

Molecular Weight (calculated)

17261.7 Da

IEP (calculated)

10.689

GRAVY (calculated)

-0.505

Length

157 amino acids

Sequence
(BLAST)

001: MASPLRRSFP SLGRALLTPA PARMLSAEAS DALVEIKPGE IGMVSGIPEE HLRRKVVIYS PARTASQQGS GKVGRWKINF LSTQKWENPL MGWTSTGDPY
101: ANVGEAGLTF NSAESAKAFA EKHGWNYVVR KRHTPLLKPK AYAENFKWKG PPKAEQA

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.