CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18667	Canola	mitochondrion	96.73	96.1
CDY08730	Canola	mitochondrion	91.5	91.5
CDY36505	Canola	mitochondrion	86.27	88.0
AT5G67590.1	Thale cress	mitochondrion	88.24	87.66
CDX87559	Canola	mitochondrion	80.39	84.25
Solyc02g092270.2.1	Tomato	plastid	37.91	76.32
VIT_07s0151g00140.t01	Wine grape	cytosol	32.03	74.24
KRH04413	Soybean	endoplasmic reticulum	68.63	71.92
KRH58129	Soybean	mitochondrion	68.63	71.92
VIT_07s0151g00490.t01	Wine grape	mitochondrion	66.67	66.23
GSMUA_AchrUn_...	Banana	mitochondrion	66.67	64.56
GSMUA_Achr8P31080_001	Banana	mitochondrion	65.36	61.35
TraesCS2A01G191500.1	Wheat	mitochondrion	62.75	60.76
TraesCS2B01G215200.1	Wheat	mitochondrion	62.75	60.76
TraesCS2D01G196100.1	Wheat	mitochondrion	62.75	60.76
Zm00001d006714_P001	Maize	mitochondrion	62.09	60.51
EER99617	Sorghum	mitochondrion	62.09	60.51
Os07t0585800-01	Rice	mitochondrion	62.75	60.38
HORVU2Hr1G035860.1	Barley	mitochondrion	64.05	50.78
VIT_00s1311g00010.t01	Wine grape	mitochondrion	35.29	45.76
PGSC0003DMT400055230	Potato	mitochondrion	15.03	41.07
Zm00001d021958_P002	Maize	mitochondrion	51.63	36.41

Protein Annotations

EnsemblPlants:CDX81305	EnsemblPlantsGene:GSBRNA2T00134832001	Gene3D:3.30.160.190	GO:A0A078CWQ7	GO:GO:0003674	GO:GO:0003824
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016651	GO:GO:0022900
InterPro:IPR038532	InterPro:NADH_UbQ_FeS_4_mit	InterPro:NDUFS4-like_sf	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	PFAM:PF04800
ProteinID:CDX81305	ProteinID:CDX81305.1	SEG:seg	UniParc:UPI0004EF28EA	MapMan:2.4.1.4.3	:

Description

BnaC09g07160D

Coordinates

chrLK031824:-:852741..853931

Molecular Weight (calculated)

17038.1 Da

IEP (calculated)

10.406

GRAVY (calculated)

-0.739

Length

153 amino acids

Sequence
(BLAST)

001: MALRATQSTA RMAATLRRVA RPFSTDAVVE SDYKRGEIGK VSGIPEEHLS RKVIIYSPAR TATQQGSGKL GKWKINFLST LKWDNPLMGW TSTGDPYANV
101: GDSALSFDSE DAAKSFADRH GWDYTVKKPK TPLLKPKSYS DNFKWKGNPQ PEK

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.