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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 8
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024437.1-P Field mustard mitochondrion 100.0 100.0
CDY36505 Canola mitochondrion 92.16 94.0
CDX81305 Canola mitochondrion 91.5 91.5
CDY18667 Canola mitochondrion 91.5 90.91
AT5G67590.1 Thale cress mitochondrion 87.58 87.01
CDX87559 Canola mitochondrion 77.12 80.82
Solyc02g092270.2.1 Tomato plastid 37.25 75.0
VIT_07s0151g00140.t01 Wine grape cytosol 32.03 74.24
KRH58129 Soybean mitochondrion 68.63 71.92
KRH04413 Soybean endoplasmic reticulum 68.63 71.92
VIT_07s0151g00490.t01 Wine grape mitochondrion 67.32 66.88
GSMUA_AchrUn_... Banana mitochondrion 67.97 65.82
GSMUA_Achr8P31080_001 Banana mitochondrion 67.32 63.19
Os07t0585800-01 Rice mitochondrion 64.71 62.26
TraesCS2A01G191500.1 Wheat mitochondrion 63.4 61.39
TraesCS2B01G215200.1 Wheat mitochondrion 63.4 61.39
TraesCS2D01G196100.1 Wheat mitochondrion 63.4 61.39
EER99617 Sorghum mitochondrion 62.09 60.51
Zm00001d006714_P001 Maize mitochondrion 62.09 60.51
HORVU2Hr1G035860.1 Barley mitochondrion 63.4 50.26
VIT_00s1311g00010.t01 Wine grape mitochondrion 35.29 45.76
PGSC0003DMT400055230 Potato mitochondrion 15.03 41.07
Zm00001d021958_P002 Maize mitochondrion 52.94 37.33
Protein Annotations
EnsemblPlants:CDY08730EnsemblPlantsGene:GSBRNA2T00000655001Gene3D:3.30.160.190GO:A0A078F2J8GO:GO:0003674GO:GO:0003824
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016651GO:GO:0022900
InterPro:IPR038532InterPro:NADH_UbQ_FeS_4_mitInterPro:NDUFS4-like_sfPANTHER:PTHR12219PANTHER:PTHR12219:SF8PFAM:PF04800
ProteinID:CDY08730ProteinID:CDY08730.1UniParc:UPI0000E86FCDUniProt:A0A078F2J8MapMan:2.4.1.4.3:
Description
BnaA06g24940DBnaA06g24940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2J8]
Coordinates
chrLK031989:+:60702..62180
Molecular Weight (calculated)
17006.2 Da
IEP (calculated)
10.332
GRAVY (calculated)
-0.595
Length
153 amino acids
Sequence
(BLAST)
001: MALRATQSTA RMAANLRRVA RPFSTDAVVE SDYKRGEIGK VSGIPEEHLA RKVIIYSPAR TATQQGSGKL GKWKINFVST LKWENPLMGW TSTGDPYANV
101: GDSALGFDSE LAAKSFAERH GWDYVVKEPK TPLLKAKSYS DNFKWKGKPQ LEN
Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)
001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN
Arabidopsis Description
FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.