CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037836.1-P	Field mustard	mitochondrion	56.16	87.23
CDY18667	Canola	mitochondrion	86.99	82.47
CDX81305	Canola	mitochondrion	84.25	80.39
CDY08730	Canola	mitochondrion	80.82	77.12
CDY36505	Canola	mitochondrion	76.71	74.67
AT5G67590.1	Thale cress	mitochondrion	77.4	73.38
KRH58129	Soybean	mitochondrion	60.27	60.27
KRH04413	Soybean	endoplasmic reticulum	60.27	60.27
VIT_07s0151g00490.t01	Wine grape	mitochondrion	60.27	57.14
Solyc02g092270.2.1	Tomato	plastid	28.77	55.26
EER99617	Sorghum	mitochondrion	56.85	52.87
Zm00001d006714_P001	Maize	mitochondrion	56.16	52.23
Os07t0585800-01	Rice	mitochondrion	56.85	52.2
GSMUA_AchrUn_...	Banana	mitochondrion	56.16	51.9
TraesCS2A01G191500.1	Wheat	mitochondrion	55.48	51.27
TraesCS2B01G215200.1	Wheat	mitochondrion	55.48	51.27
TraesCS2D01G196100.1	Wheat	mitochondrion	55.48	51.27
GSMUA_Achr8P31080_001	Banana	mitochondrion	56.85	50.92
VIT_07s0151g00140.t01	Wine grape	cytosol	21.92	48.48
VIT_00s1311g00010.t01	Wine grape	mitochondrion	39.04	48.31
HORVU2Hr1G035860.1	Barley	mitochondrion	56.85	43.01
PGSC0003DMT400055230	Potato	mitochondrion	16.44	42.86
Zm00001d021958_P002	Maize	mitochondrion	56.85	38.25

Protein Annotations

MapMan:2.4.1.4.3	Gene3D:3.30.160.190	GO:A0A078DGP7	EnsemblPlants:CDX87559	ProteinID:CDX87559	ProteinID:CDX87559.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016651	GO:GO:0022900	EnsemblPlantsGene:GSBRNA2T00146557001	InterPro:IPR038532	InterPro:NADH_UbQ_FeS_4_mit	InterPro:NDUFS4-like_sf
PFAM:PF04800	PANTHER:PTHR12219	PANTHER:PTHR12219:SF8	TMHMM:TMhelix	UniParc:UPI0004EDECDE	SEG:seg

Description

BnaA07g33140D

Coordinates

chrLK031850:-:1199149..1199828

Molecular Weight (calculated)

16191.2 Da

IEP (calculated)

9.153

GRAVY (calculated)

-0.099

Length

146 amino acids

Sequence
(BLAST)

001: MALRATQSTG RIAAAALRRV ARPFSTDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQQGSGK LGKWKINFLS TLKWENPLMG WTSTGDPYAN
101: VGDSALSFDS EDAAKSFADR HGWDYTVCFF VSFFVISNLS CFFIFF

Best Arabidopsis Sequence Match ( AT5G67590.1 )
(BLAST)

001: MALCATTQRT IRIAATLRRV ARPFATDAVV ESDYKRGEIG KVSGIPEEHL SRKVIIYSPA RTATQSGSGK LGKWKINFVS TLKWENPLMG WTSTGDPYAN
101: VGDSALAFDS EEAAKSFAER HGWDYKVKKP NTPLLKVKSY SDNFKWKGNP QPEN

Arabidopsis Description

FRO1NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FJW4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.