CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G079270.1	Barley	extracellular	97.83	97.83
CDY45493	Canola	extracellular	57.61	82.81
HORVU5Hr1G079280.1	Barley	extracellular	63.04	80.56
TraesCS7D01G492900.1	Wheat	cytosol, endoplasmic reticulum, vacuole	100.0	52.57
TraesCS7A01G479400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	100.0	52.57
TraesCS5A01G133400.1	Wheat	cytosol, endoplasmic reticulum, vacuole	100.0	52.57
TraesCS5A01G020600.1	Wheat	vacuole	100.0	52.57
TraesCS2D01G564600.1	Wheat	vacuole	100.0	52.57
TraesCS7B01G488700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	100.0	52.57
TraesCS3B01G189600.1	Wheat	vacuole	98.91	52.0
TraesCS4A01G069700.1	Wheat	vacuole	98.91	52.0
TraesCS4A01G171000.1	Wheat	vacuole	98.91	52.0
TraesCS7B01G488300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	98.91	52.0
Solyc10g045750.1.1	Tomato	extracellular	54.35	51.55
HORVU0Hr1G033670.1	Barley	vacuole	95.65	51.46
TraesCS1B01G068900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	97.83	51.43
TraesCS3B01G363700.1	Wheat	vacuole	96.74	50.86
TraesCS7A01G164200.1	Wheat	vacuole	96.74	50.86
TraesCS7A01G237700.1	Wheat	endoplasmic reticulum	96.74	50.86
TraesCS6A01G202500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	94.57	50.0
TraesCS1A01G184200.1	Wheat	endoplasmic reticulum	95.65	48.62
HORVU6Hr1G085230.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	90.22	47.43
KRH33086	Soybean	plasma membrane	78.26	30.0
BAC19875	Rice	plasma membrane	81.52	15.15
GRMZM5G804358_P02	Maize	plasma membrane	81.52	15.15
ATMG00580.1	Thale cress	plasma membrane	71.74	13.33
VIT_00s0629g00020.t01	Wine grape	mitochondrion	8.7	4.04
CDY45494	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	1.09	1.33

Protein Annotations

MapMan:35.1	UniProt:A0A1W0VXS1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0042773	GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase	EnsemblPlants:OQU86913	ProteinID:OQU86913	ProteinID:OQU86913.1
PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	EnsemblPlantsGene:SORBI_3003G173200	TMHMM:TMhelix	UniParc:UPI0003D5759C	:

Description

hypothetical protein

Coordinates

chr3:+:38410143..38411429

Molecular Weight (calculated)

10240.2 Da

IEP (calculated)

5.688

GRAVY (calculated)

1.229

Length

92 amino acids

Sequence
(BLAST)

1: MGIDGLSLFF VILTTFLIPI CISVGWSGMR SFGKEYITAF LIREFLMIAV SCMLDPLLFY VLSESVPIPM LCGAEHLLFA GIKLFLCRGL VQ

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.