Factsheet for HORVU6Hr1G085230.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G189600.1	Wheat	vacuole	92.0	92.0
TraesCS2D01G564600.1	Wheat	vacuole	92.0	92.0
HORVU0Hr1G033670.1	Barley	vacuole	89.71	91.81
TraesCS7B01G488300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	91.43	91.43
TraesCS5A01G020600.1	Wheat	vacuole	91.43	91.43
TraesCS7A01G164200.1	Wheat	vacuole	91.43	91.43
TraesCS3B01G363700.1	Wheat	vacuole	90.86	90.86
OQU86913	Sorghum	extracellular	47.43	90.22
TraesCS7A01G237700.1	Wheat	endoplasmic reticulum	89.71	89.71
TraesCS1B01G068900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	89.14	89.14
HORVU5Hr1G079270.1	Barley	extracellular	46.29	88.04
TraesCS6A01G202500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	87.43	87.93
CDY45494	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	32.57	76.0
HORVU5Hr1G079280.1	Barley	extracellular	29.71	72.22
CDY45493	Canola	extracellular	25.71	70.31
HORVU7Hr1G058380.2	Barley	endoplasmic reticulum	81.14	57.96
KRH33086	Soybean	plasma membrane	77.14	56.25
Solyc10g045750.1.1	Tomato	extracellular	29.14	52.58
BAV58151	Barley	plasma membrane	82.86	29.29
ATMG00580.1	Thale cress	plasma membrane	72.0	25.45
HORVU2Hr1G061070.1	Barley	extracellular, vacuole	1.14	3.92
VIT_00s0629g00020.t01	Wine grape	mitochondrion	4.0	3.54
HORVU6Hr1G044660.2	Barley	endoplasmic reticulum	1.71	1.68
HORVU5Hr1G079410.1	Barley	endoplasmic reticulum	1.71	1.68

Protein Annotations

EnsemblPlants:HORVU6Hr1G085230.2	EnsemblPlantsGene:HORVU6Hr1G085230	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091
GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0042773	GO:GO:0055114	InterPro:NADH_UbQ_OxRdtase	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6
TMHMM:TMhelix	UniParc:UPI000B472FEF	UniProt:A0A287V0L6	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr6H:+:558089414..558089941

Molecular Weight (calculated)

19927.1 Da

IEP (calculated)

6.479

GRAVY (calculated)

0.789

Length

175 amino acids

Sequence
(BLAST)

001: MLEHFCECYF DLSGPILCPV LGTITPLFIP NSSTRQIRLI GMCVSLITFL YPHVPRIQFD PSTAKSQFVE SLRWLPYENI HLYMGIDGLP LFFVILTTFL
101: IPICISVGWS GMRSFGKEYI TTFIIREFLM IVVSCMQDPL LFCVLSESVT IPMLCGVEHL LFTGIKLFLC RGLVQ

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.