CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G079280.1	Barley	extracellular	75.0	66.67
HORVU5Hr1G079270.1	Barley	extracellular	82.81	57.61
OQU86913	Sorghum	extracellular	82.81	57.61
Solyc10g045750.1.1	Tomato	extracellular	53.12	35.05
TraesCS5A01G020600.1	Wheat	vacuole	82.81	30.29
TraesCS4A01G171000.1	Wheat	vacuole	82.81	30.29
TraesCS5A01G133400.1	Wheat	cytosol, endoplasmic reticulum, vacuole	82.81	30.29
TraesCS2D01G564600.1	Wheat	vacuole	82.81	30.29
TraesCS7A01G479400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	82.81	30.29
TraesCS7B01G488700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	82.81	30.29
TraesCS7D01G492900.1	Wheat	cytosol, endoplasmic reticulum, vacuole	82.81	30.29
TraesCS3B01G189600.1	Wheat	vacuole	81.25	29.71
TraesCS4A01G069700.1	Wheat	vacuole	81.25	29.71
TraesCS7B01G488300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	81.25	29.71
TraesCS6A01G202500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	79.69	29.31
HORVU0Hr1G033670.1	Barley	vacuole	78.12	29.24
TraesCS7A01G237700.1	Wheat	endoplasmic reticulum	79.69	29.14
TraesCS7A01G164200.1	Wheat	vacuole	79.69	29.14
TraesCS1B01G068900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	79.69	29.14
TraesCS3B01G363700.1	Wheat	vacuole	78.12	28.57
TraesCS1A01G184200.1	Wheat	endoplasmic reticulum	76.56	27.07
HORVU6Hr1G085230.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	70.31	25.71
KRH33086	Soybean	plasma membrane	73.44	19.58
ATMG00580.1	Thale cress	plasma membrane	70.31	9.09
BAC19875	Rice	plasma membrane	62.5	8.08
GRMZM5G804358_P02	Maize	plasma membrane	62.5	8.08
VIT_00s0629g00020.t01	Wine grape	mitochondrion	7.81	2.53
CDY45494	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	1.56	1.33

Protein Annotations

MapMan:35.1	GO:A0A078I8L5	UniProt:A0A078I8L5	EnsemblPlants:CDY45493	ProteinID:CDY45493	ProteinID:CDY45493.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091	GO:GO:0006139	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0042773
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00082151001	InterPro:NADH_UbQ_OxRdtase	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	TMHMM:TMhelix
UniParc:UPI0004EE90C2	:	:	:	:	:

Description

BnaCnng12520DBnaCnng12520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8L5]

Coordinates

chrLK032627:-:53096..53290

Molecular Weight (calculated)

7515.6 Da

IEP (calculated)

8.723

GRAVY (calculated)

0.864

Length

64 amino acids

Sequence
(BLAST)

1: MRSYGKEYIT AFLIREFLMI AVFRMLDLLL FYVFPESVPI PMLCGAEYLI FAGRKLFLCR GLVQ

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.