Factsheet for TraesCS1A01G184200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86913	Sorghum	extracellular	48.62	95.65
TraesCS7A01G479400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	90.61	93.71
TraesCS5A01G133400.1	Wheat	cytosol, endoplasmic reticulum, vacuole	90.61	93.71
HORVU5Hr1G079270.1	Barley	extracellular	47.51	93.48
TraesCS5A01G020600.1	Wheat	vacuole	90.06	93.14
TraesCS7A01G164200.1	Wheat	vacuole	88.95	92.0
TraesCS4A01G069700.1	Wheat	vacuole	88.95	92.0
TraesCS7A01G237700.1	Wheat	endoplasmic reticulum	88.4	91.43
TraesCS4A01G171000.1	Wheat	vacuole	88.4	91.43
TraesCS6A01G202500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	86.19	89.66
CDY45494	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	32.04	77.33
CDY45493	Canola	extracellular	27.07	76.56
Solyc10g045750.1.1	Tomato	extracellular	30.94	57.73
KRH33086	Soybean	plasma membrane	74.59	56.25
TraesCS7A01G165200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	82.87	45.73
TraesCS2A01G509100.1	Wheat	plasma membrane	83.43	30.51
ATMG00580.1	Thale cress	plasma membrane	74.03	27.07
VIT_00s0629g00020.t01	Wine grape	mitochondrion	6.08	5.56

Protein Annotations

EnsemblPlants:TraesCS1A01G184200.1	EnsemblPlantsGene:TraesCS1A01G184200	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006139
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0042773	GO:GO:0055114
InterPro:NADH_UbQ_OxRdtase	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr1A:-:334074389..334075924

Molecular Weight (calculated)

20350.7 Da

IEP (calculated)

7.335

GRAVY (calculated)

0.815

Length

181 amino acids

Sequence
(BLAST)

001: MLAHFCECYY GLSGPILYPV LGSITPLLIP NSSIRPIRLI GMCVSLITFL YPPVPRIQFD PSTAKSQFVE SLQWLPYENI HLYMGIDGLS LFFVILTTFL
101: IPICISVGWS GMRSFGKEYI TTFLIREFLM IAMSCMLDPL LFHVLSESVP IPMLCGAEHL LFAGITLFLC RGLVQKIKAA Y

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.