Factsheet for TraesCS7A01G165200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G197000.1	Wheat	plasma membrane	89.33	97.67
TraesCS2D01G089800.1	Wheat	plasma membrane	87.8	96.0
HORVU7Hr1G058380.2	Barley	endoplasmic reticulum	71.65	95.92
TraesCS1B01G189000.1	Wheat	plasma membrane	92.07	93.5
TraesCS5A01G133400.1	Wheat	cytosol, endoplasmic reticulum, vacuole	47.87	89.71
TraesCS5A01G020600.1	Wheat	vacuole	47.56	89.14
TraesCS7A01G479400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	47.26	88.57
TraesCS7A01G164200.1	Wheat	vacuole	46.95	88.0
TraesCS4A01G069700.1	Wheat	vacuole	46.95	88.0
TraesCS4A01G171000.1	Wheat	vacuole	46.65	87.43
TraesCS6A01G202500.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	46.34	87.36
TraesCS7A01G237700.1	Wheat	endoplasmic reticulum	46.34	86.86
TraesCS1A01G184200.1	Wheat	endoplasmic reticulum	45.73	82.87
VIT_00s0629g00020.t01	Wine grape	mitochondrion	44.51	73.74
TraesCS5B01G572900.1	Wheat	plasma membrane	93.29	62.58
TraesCS2A01G509100.1	Wheat	plasma membrane	93.9	62.22
ATMG00580.1	Thale cress	plasma membrane	86.89	57.58

Protein Annotations

EnsemblPlants:TraesCS7A01G165200.1	EnsemblPlantsGene:TraesCS7A01G165200	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006139
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0042773	GO:GO:0055114
InterPro:NADH_Q_OxRdtase_chainM/4	InterPro:NADH_UbQ_OxRdtase	InterPro:ND/Mrp_mem	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	PFAM:PF00361
PRINTS:PR01437	SEG:seg	TIGRFAMs:TIGR01972	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr7A:-:120919243..120924841

Molecular Weight (calculated)

37071.6 Da

IEP (calculated)

7.358

GRAVY (calculated)

0.840

Length

328 amino acids

Sequence
(BLAST)

001: MLEHFCECYF DLSGPILCPV LGSITPLFIP NSSIRPIRLI GLCVSLITLS YPPVPRIQFD PSTAKSQFVE SLRWLPYENI HLYMGIDGLS LFFVILTTFL
101: IPICISVGWS GMRSFGKEYI TAFLIREFLM IAVSCMLDPL LFYVLSESVP IPMLNIKAAY QFFLYTLLGS VFMLLAILLI LLQTGTTDLQ ILLTTEFSER
201: RQILLWIAFF ASFAVKVPMV PVHIWLPEAH VEAPTAGSVI LAGILLKLGT YGFLRFSIPM FPEATLCFTP FIYTLSAIAI IYTSLTTLRQ IDLKKIIAYS
301: SVAHMNLVTI GMFSRRTYRE LEVAFYLC

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.