Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G197000.1 | Wheat | plasma membrane | 89.47 | 96.33 |
| HORVU7Hr1G058380.2 | Barley | endoplasmic reticulum | 71.21 | 93.88 |
| TraesCS7A01G165200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 93.5 | 92.07 |
| TraesCS7B01G488700.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 47.68 | 88.0 |
| TraesCS7B01G488300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 47.37 | 87.43 |
| TraesCS3B01G189600.1 | Wheat | vacuole | 47.06 | 86.86 |
| TraesCS3B01G363700.1 | Wheat | vacuole | 46.13 | 85.14 |
| TraesCS1B01G068900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 45.82 | 84.57 |
| VIT_00s0629g00020.t01 | Wine grape | mitochondrion | 46.13 | 75.25 |
| TraesCS5B01G572900.1 | Wheat | plasma membrane | 92.57 | 61.15 |
| ATMG00580.1 | Thale cress | plasma membrane | 86.07 | 56.16 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G189000.1 | EnsemblPlantsGene:TraesCS1B01G189000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006091 | GO:GO:0006139 |
| GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0042773 | GO:GO:0055114 |
| InterPro:NADH_Q_OxRdtase_chainM/4 | InterPro:NADH_UbQ_OxRdtase | InterPro:ND/Mrp_mem | PANTHER:PTHR43507 | PANTHER:PTHR43507:SF6 | PFAM:PF00361 |
| PRINTS:PR01437 | SEG:seg | TIGRFAMs:TIGR01972 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1B:+:338929441..338931454
Molecular Weight (calculated)
36433.1 Da
IEP (calculated)
8.192
GRAVY (calculated)
0.935
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEHFCECYF ELSGPILCPV LGSITPIFIP NSSIRPIRLI GLCVSLITFL YPPIPRIQFD PSTAKYQFVE SLRWLPYENI HLYMGIDGLS LFFMILTTFL
101: IPICISVGWS GMRSFGKEYI TAFLIREFLM IAVSCMLDPL LFYVLSESVP IPMLKIKAAY QFFLYTLLGS VFMLLAILLI LLQTGTTDLQ ILLTTKFSER
201: CQILLWIAFF ASFAVKVPMV PVHIWLPEAH VEAATAGSVI LAGILLKLGT YGFLRFFIPM FPEATLCFTP FIYTLSAIAI IYTSLTTLRQ IDLKKIIAYS
301: SVAHMNLVTI GMFSRAAAVR SLF
101: IPICISVGWS GMRSFGKEYI TAFLIREFLM IAVSCMLDPL LFYVLSESVP IPMLKIKAAY QFFLYTLLGS VFMLLAILLI LLQTGTTDLQ ILLTTKFSER
201: CQILLWIAFF ASFAVKVPMV PVHIWLPEAH VEAATAGSVI LAGILLKLGT YGFLRFFIPM FPEATLCFTP FIYTLSAIAI IYTSLTTLRQ IDLKKIIAYS
301: SVAHMNLVTI GMFSRAAAVR SLF
001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
Arabidopsis Description
NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.