Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 5
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G197000.1 | Wheat | plasma membrane | 59.51 | 97.0 |
| HORVU7Hr1G058380.2 | Barley | endoplasmic reticulum | 47.24 | 94.29 |
| TraesCS7A01G165200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 62.58 | 93.29 |
| TraesCS1B01G189000.1 | Wheat | plasma membrane | 61.15 | 92.57 |
| ATMG00580.1 | Thale cress | plasma membrane | 90.59 | 89.49 |
| TraesCS7B01G488700.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 31.29 | 87.43 |
| TraesCS7B01G488300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.08 | 86.86 |
| TraesCS3B01G189600.1 | Wheat | vacuole | 30.88 | 86.29 |
| TraesCS3B01G363700.1 | Wheat | vacuole | 30.67 | 85.71 |
| TraesCS1B01G068900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 30.27 | 84.57 |
| VIT_00s0629g00020.t01 | Wine grape | mitochondrion | 29.65 | 73.23 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G572900.1 | EnsemblPlantsGene:TraesCS5B01G572900 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006091 | GO:GO:0006139 |
| GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0042773 | GO:GO:0055114 |
| InterPro:NADH_Q_OxRdtase_chainM/4 | InterPro:NADH_UbQ_OxRdtase | InterPro:ND/Mrp_mem | PANTHER:PTHR43507 | PANTHER:PTHR43507:SF6 | PFAM:PF00361 |
| PRINTS:PR01437 | SEG:seg | TIGRFAMs:TIGR01972 | TMHMM:TMhelix | MapMan:2.4.1.3.4 | : |
Description
No Description!
Coordinates
chr5B:-:713037232..713045210
Molecular Weight (calculated)
54659.6 Da
IEP (calculated)
8.860
GRAVY (calculated)
0.795
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEHFCECYF DLSGPILCPV LGSITPLFIP NSSIRPIRLI GLCVSLITFL YPPVPRIQFD PSTAKSQFVE SLRWLPYKNI HLYMGIDGLS LFFMILTTFL
101: IPICISVGWS GLRSFGKEYI TTFLIREFLM IAVSCMPDPL LFYVLSESVP IPMFIIIGVW GSRQRKIKAT YQFFLYTLLG SVFMLLAILL ILLQTGTTDL
201: QILLTTEFSE RRQILLWIAF FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKLG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR
301: QIDLKKIIAY SSVAHINLVT IGMFSPNIEG IGGSILLMLS HGLVSSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNFSTI FFFFTLANMS LPSTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLYKFS DLNGREVSIF LPFLVGVVRM GVHPKVFPDC MHTSVSNLV
101: IPICISVGWS GLRSFGKEYI TTFLIREFLM IAVSCMPDPL LFYVLSESVP IPMFIIIGVW GSRQRKIKAT YQFFLYTLLG SVFMLLAILL ILLQTGTTDL
201: QILLTTEFSE RRQILLWIAF FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGILLKLG TYGFLRFSIP MFPEATLCFT PFIYTLSAIA IIYTSLTTLR
301: QIDLKKIIAY SSVAHINLVT IGMFSPNIEG IGGSILLMLS HGLVSSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNFSTI FFFFTLANMS LPSTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLYKFS DLNGREVSIF LPFLVGVVRM GVHPKVFPDC MHTSVSNLV
001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
Arabidopsis Description
NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.