Factsheet for HORVU7Hr1G058380.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G033670.1	Barley	vacuole	62.45	89.47
HORVU6Hr1G085230.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	57.96	81.14
HORVU2Hr1G061070.1	Barley	extracellular, vacuole	16.33	78.43
TraesCS3D01G197000.1	Wheat	plasma membrane	95.51	78.0
TraesCS2D01G089800.1	Wheat	plasma membrane	94.29	77.0
HORVU5Hr1G079270.1	Barley	extracellular	28.16	75.0
TraesCS7A01G165200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	95.92	71.65
TraesCS1B01G189000.1	Wheat	plasma membrane	93.88	71.21
HORVU5Hr1G079280.1	Barley	extracellular	18.37	62.5
BAV58151	Barley	plasma membrane	96.73	47.88
TraesCS5B01G572900.1	Wheat	plasma membrane	94.29	47.24
ATMG00580.1	Thale cress	plasma membrane	87.35	43.23
VIT_00s0629g00020.t01	Wine grape	mitochondrion	33.88	41.92
HORVU5Hr1G079410.1	Barley	endoplasmic reticulum	27.76	37.99
HORVU6Hr1G044660.2	Barley	endoplasmic reticulum	25.71	35.2

Protein Annotations

MapMan:35.1	UniProt:A0A287WMJ3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091
GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0042773	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G058380	EnsemblPlants:HORVU7Hr1G058380.2
InterPro:NADH_UbQ_OxRdtase	InterPro:ND/Mrp_mem	PFAM:PF00361	PRINTS:PR01437	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6
TMHMM:TMhelix	UniParc:UPI000B47A169	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:259075469..259077643

Molecular Weight (calculated)

27389.6 Da

IEP (calculated)

5.594

GRAVY (calculated)

0.929

Length

245 amino acids

Sequence
(BLAST)

001: MLEHFCECYF DLSGPILCPV LGSITPLFIP NSSIRPIRLI GLCVSLITFL YPPVPRIQFD PSTAKSQFVE SLRWLPYENI HLYMGIDGLS LFFVILTTFL
101: TPICISVGWS GMRXXXKEYI TAFLIREFLM IVVSCMLDPL LFYVLSESVP IPMLKIKAAY QFFLYTLLGS VFMLLAILLI LLQTGTTDLQ ILLTTEFSEW
201: RQILLWIAFF ASFVVKVPMV PVHIWLPEAH VEAPTAGSVI LAGIL

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.