Factsheet for HORVU6Hr1G044660.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 6
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G079410.1	Barley	endoplasmic reticulum	86.03	86.03
HORVU2Hr1G061070.1	Barley	extracellular, vacuole	21.79	76.47
VIT_00s0629g00020.t01	Wine grape	mitochondrion	71.51	64.65
BAV58151	Barley	plasma membrane	72.07	26.06
HORVU7Hr1G058380.2	Barley	endoplasmic reticulum	35.2	25.71
HORVU5Hr1G079280.1	Barley	extracellular	2.23	5.56
HORVU5Hr1G079270.1	Barley	extracellular	2.23	4.35
HORVU0Hr1G033670.1	Barley	vacuole	1.68	1.75
HORVU6Hr1G085230.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	1.68	1.71

Protein Annotations

MapMan:35.1	UniProt:A0A287U367	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091
GO:GO:0006139	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0042773	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G044660	EnsemblPlants:HORVU6Hr1G044660.2	InterPro:NADH_UbQ_OxRdtase
InterPro:ND/Mrp_mem	PFAM:PF00361	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	TMHMM:TMhelix	UniParc:UPI000B4700CC
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:257119874..257120413

Molecular Weight (calculated)

20147.4 Da

IEP (calculated)

10.283

GRAVY (calculated)

0.715

Length

179 amino acids

Sequence
(BLAST)

001: MLLAILLILL QTGTTYLQIL LTTEFSERRQ ILLWLSFFAS FVAKVPMVLV HIWLHEAHVE APTAGCVILA RILLKLGTYG FLRFSIPMFP EATHCFTPFV
101: YSRSAIAIIY TSLTTLRQID LKKIIAYSLV AHMNLVTIGM FSRAAAVRSP IFSYRHTSKA RTCVSCVRPI NLLALGEKT

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.