Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- extracellular 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G044660.2 | Barley | endoplasmic reticulum | 86.03 | 86.03 |
| HORVU2Hr1G061070.1 | Barley | extracellular, vacuole | 21.23 | 74.51 |
| VIT_00s0629g00020.t01 | Wine grape | mitochondrion | 75.98 | 68.69 |
| BAV58151 | Barley | plasma membrane | 78.21 | 28.28 |
| HORVU7Hr1G058380.2 | Barley | endoplasmic reticulum | 37.99 | 27.76 |
| HORVU5Hr1G079280.1 | Barley | extracellular | 2.23 | 5.56 |
| HORVU5Hr1G079270.1 | Barley | extracellular | 2.23 | 4.35 |
| HORVU0Hr1G033670.1 | Barley | vacuole | 1.68 | 1.75 |
| HORVU6Hr1G085230.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 1.68 | 1.71 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A287RY69 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006091 |
| GO:GO:0006139 | GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0042773 | GO:GO:0055114 | EnsemblPlantsGene:HORVU5Hr1G079410 | EnsemblPlants:HORVU5Hr1G079410.1 | InterPro:NADH_UbQ_OxRdtase |
| InterPro:ND/Mrp_mem | PFAM:PF00361 | PANTHER:PTHR43507 | PANTHER:PTHR43507:SF6 | SignalP:SignalP-TM | TMHMM:TMhelix |
| UniParc:UPI000B462209 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:556818409..556818948
Molecular Weight (calculated)
19540.6 Da
IEP (calculated)
9.945
GRAVY (calculated)
0.720
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLAILLILL QTGTTDLQML LTTESSERRQ ILLWIAFFAS FAVKVPMVPV HIWLPEAHVE APTAGSVILA GILLKLGTYG FLRFSIPMFP EATLCFTPFI
101: YTLSAIAIIY TSLTTLRQID LKKIIANSSV AHMNLVTIDM FSRAAAVRSP ILSSGHTSKA KTCVPGVRPI NLLAIGEKT
101: YTLSAIAIIY TSLTTLRQID LKKIIANSSV AHMNLVTIDM FSRAAAVRSP ILSSGHTSKA KTCVPGVRPI NLLAIGEKT
001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH
Arabidopsis Description
NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.