Factsheet for HORVU5Hr1G079280.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45493	Canola	extracellular	66.67	75.0
HORVU5Hr1G079270.1	Barley	extracellular	80.56	63.04
OQU86913	Sorghum	extracellular	80.56	63.04
TraesCS7B01G488700.1	Wheat	cytosol, endoplasmic reticulum, vacuole	83.33	34.29
TraesCS4A01G069700.1	Wheat	vacuole	81.94	33.71
HORVU0Hr1G033670.1	Barley	vacuole	77.78	32.75
HORVU6Hr1G085230.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	72.22	29.71
Solyc10g045750.1.1	Tomato	extracellular	38.89	28.87
KRH33086	Soybean	plasma membrane	65.28	19.58
HORVU7Hr1G058380.2	Barley	endoplasmic reticulum	62.5	18.37
BAV58151	Barley	plasma membrane	61.11	8.89
ATMG00580.1	Thale cress	plasma membrane	52.78	7.68
HORVU2Hr1G061070.1	Barley	extracellular, vacuole	4.17	5.88
CDY45494	Canola	endoplasmic reticulum, extracellular, plastid, vacuole	4.17	4.0
VIT_00s0629g00020.t01	Wine grape	mitochondrion	8.33	3.03
HORVU6Hr1G044660.2	Barley	endoplasmic reticulum	5.56	2.23
HORVU5Hr1G079410.1	Barley	endoplasmic reticulum	5.56	2.23

Protein Annotations

EnsemblPlants:HORVU5Hr1G079280.1	EnsemblPlantsGene:HORVU5Hr1G079280	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006139
GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0042773	GO:GO:0055114
InterPro:NADH_UbQ_OxRdtase	PANTHER:PTHR43507	PANTHER:PTHR43507:SF6	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr5H:-:556656553..556657029

Molecular Weight (calculated)

7768.0 Da

IEP (calculated)

8.497

GRAVY (calculated)

0.836

Length

72 amino acids

Sequence
(BLAST)

1: SVFRSKKGNK LXXXEYITAF LIREFLMIAV SCMLDPLLFY VLSESVPIPM LCGAEHLLFA GIKLFLCKGL VQ

Best Arabidopsis Sequence Match ( ATMG00580.1 )
(BLAST)

001: MLEHFCECYS NLSGLILCPV LGSITLLFIP NSRIRPIRLI GLCASLITFL YSPVPRIQFD SSTAKSQFVE SLRWLPYENI NFYLGIDGIS LFFVILTTFL
101: IPICISVGWS GMRSYGKEYI TAFLIREFLM IAVFRMLDLL LFYVFPESVP IPMFIIIGVW GSRQRKIKAA YQFFLYTLLG SLFMLLAILL ILFQTGTTDL
201: QISLTTEFSE RRQIFLWIAS FASFAVKVPM VPVHIWLPEA HVEAPTAGSV ILAGIPLKFG THGFLRFSIP MFPEATLCST PFIYTLSAIA IIYTSLTTSR
301: QIDLKKIIAY SSVAHMNLVT IGMFSPNIQG IGGSILPMLS HGLVPSALFL CVGVLYDRHK TRLVRYYGGL VSTMPNLSTI FFSFTLANMS SPGTSSFIGE
401: FLILVGAFQR NSLVATLAAL GMILGAAYSL WLYNRVVSGN LKPDFLHKFS DSNGREVSIF IPFLVGLVRM GVHPKVFPDC MHTSVSNLVQ HGKFH

Arabidopsis Description

NAD4NADH-ubiquinone oxidoreductase chain 4 [Source:UniProtKB/TrEMBL;Acc:G1C2U9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.